RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 THAP9Q9H5L6 903 aa22.58■■□□□ 1.2
CSPG5-203ENST00000456150 LZTFL1Q9NQ48 299 aa22.58■■□□□ 1.2
CSPG5-203ENST00000456150 PODXL2Q9NZ53 605 aa22.58■■□□□ 1.2
CSPG5-203ENST00000456150 GAKO14976 1311 aa22.57■■□□□ 1.2
CSPG5-203ENST00000456150 SMCO2A6NFE2 343 aa22.57■■□□□ 1.2
CSPG5-203ENST00000456150 EEF1GP26641 437 aaKnown RBP22.57■■□□□ 1.2
CSPG5-203ENST00000456150 CYP26C1Q6V0L0 522 aa22.57■■□□□ 1.2
CSPG5-203ENST00000456150 NOC3LQ8WTT2 800 aaKnown RBP22.57■■□□□ 1.2
CSPG5-203ENST00000456150 MAPK8IP1Q9UQF2 711 aa22.57■■□□□ 1.2
CSPG5-203ENST00000456150 KLRG2A4D1S0 409 aaPredicted RBP22.56■■□□□ 1.2
CSPG5-203ENST00000456150 hCG_1984214I3L0E3 225 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 KLRC4O43908 158 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 RHBDL3P58872 404 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 NEK8Q86SG6 692 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 CABP7Q86V35 215 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 ZNF713Q8N859 430 aaPredicted RBP22.56■■□□□ 1.2
CSPG5-203ENST00000456150 CCNT1O60563 726 aaKnown RBP22.56■■□□□ 1.2
CSPG5-203ENST00000456150 NOVP48745 357 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 UBXN1Q04323 297 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 TUBB2AQ13885 445 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 TMCO3Q6UWJ1 677 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 CREBRFQ8IUR6 639 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 GIMAP8Q8ND71 665 aaPredicted RBP22.56■■□□□ 1.2
CSPG5-203ENST00000456150 TUBB2BQ9BVA1 445 aa22.56■■□□□ 1.2
CSPG5-203ENST00000456150 ESYT2A0FGR8 921 aa22.55■■□□□ 1.2
CSPG5-203ENST00000456150 LETM2Q2VYF4 491 aa22.55■■□□□ 1.2
CSPG5-203ENST00000456150 USP17L2Q6R6M4 530 aa22.55■■□□□ 1.2
CSPG5-203ENST00000456150 GPR161Q8N6U8 529 aaKnown RBP22.55■■□□□ 1.2
CSPG5-203ENST00000456150 CEP95Q96GE4 821 aa22.55■■□□□ 1.2
CSPG5-203ENST00000456150 PPP1R2P41236 205 aa22.54■■□□□ 1.2
CSPG5-203ENST00000456150 DHTKD1Q96HY7 919 aaPredicted RBP22.54■■□□□ 1.2
CSPG5-203ENST00000456150 TRIM47Q96LD4 638 aa22.54■■□□□ 1.2
CSPG5-203ENST00000456150 MAGEC2Q9UBF1 373 aaPredicted RBP22.54■■□□□ 1.2
CSPG5-203ENST00000456150 PLIN4Q96Q06 1357 aa22.54■■□□□ 1.2
CSPG5-203ENST00000456150 A0A1W2PQC6 194 aa22.54■■□□□ 1.2
CSPG5-203ENST00000456150 LGALS16A8MUM7 142 aa22.54■■□□□ 1.2
CSPG5-203ENST00000456150 PLCG1P19174 1290 aa22.54■■□□□ 1.2
CSPG5-203ENST00000456150 CPVLQ9H3G5 476 aa22.54■■□□□ 1.2
CSPG5-203ENST00000456150 TRIM49BA6NDI0 452 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 HOXA10P31260 410 aaPredicted RBP22.53■■□□□ 1.2
CSPG5-203ENST00000456150 KRT9P35527 623 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 ERVK-24P63145 666 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 RSRC2Q7L4I2 434 aaKnown RBP22.53■■□□□ 1.2
CSPG5-203ENST00000456150 IRF2BP1Q8IU81 584 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 TBC1D16Q8TBP0 767 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 GOLGA1Q92805 767 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 PLIN2Q99541 437 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 QSER1Q2KHR3 1735 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 AMPD3Q01432 767 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 REXO1Q8N1G1 1221 aaKnown RBP22.53■■□□□ 1.2
CSPG5-203ENST00000456150 MB21D1Q8N884 522 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 RABGGTAQ92696 567 aa22.53■■□□□ 1.2
CSPG5-203ENST00000456150 LRRC37AA6NMS7 1700 aa22.52■■□□□ 1.2
CSPG5-203ENST00000456150 BICDL2A1A5D9 508 aa22.52■■□□□ 1.2
CSPG5-203ENST00000456150 CRAMP1Q96RY5 1269 aa22.52■■□□□ 1.2
CSPG5-203ENST00000456150 PIGSQ96S52 555 aa22.52■■□□□ 1.2
CSPG5-203ENST00000456150 IRX2Q9BZI1 471 aaPredicted RBP22.52■■□□□ 1.2
CSPG5-203ENST00000456150 RIOX1Q9H6W3 641 aa22.52■■□□□ 1.2
CSPG5-203ENST00000456150 EXOC1Q9NV70 894 aa22.52■■□□□ 1.2
CSPG5-203ENST00000456150 MYO1AQ9UBC5 1043 aa22.52■■□□□ 1.2
CSPG5-203ENST00000456150 POLLQ9UGP5 575 aa22.52■■□□□ 1.2
CSPG5-203ENST00000456150 TEX35Q5T0J7 233 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 TTI2Q6NXR4 508 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 TMC4Q7Z404 712 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 C7orf25Q9BPX7 421 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 FHOD1Q9Y613 1164 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 ATP8B1O43520 1251 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 ZRANB2O95218 330 aaKnown RBP eCLIP22.51■■□□□ 1.19
CSPG5-203ENST00000456150 SRGNP10124 158 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 PMS1P54277 932 aaKnown RBP22.51■■□□□ 1.19
CSPG5-203ENST00000456150 ASPRV1Q53RT3 343 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 ZNF569Q5MCW4 686 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 ACRBPQ8NEB7 543 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 TBCKQ8TEA7 893 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 CALML4Q96GE6 196 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 TRIM9Q9C026 710 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 VAT1LQ9HCJ6 419 aa22.51■■□□□ 1.19
CSPG5-203ENST00000456150 COL11A2P13942 1736 aaPredicted RBP22.5■■□□□ 1.19
CSPG5-203ENST00000456150 LTBP1Q14766 1721 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 CTAGE9A4FU28 777 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 C6orf229H3BNL8 230 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 DNM2P50570 870 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 FAM114A1Q8IWE2 563 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 CEP112Q8N8E3 955 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 CDC23Q9UJX2 597 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 PRDM4Q9UKN5 801 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 USP17L5A8MUK1 530 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 PNMA6AP0CW24 399 aaPredicted RBP22.5■■□□□ 1.19
CSPG5-203ENST00000456150 PDHBP11177 359 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 CCNE1P24864 410 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 PDE4DQ08499 809 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 TSR1Q2NL82 804 aaKnown RBP22.5■■□□□ 1.19
CSPG5-203ENST00000456150 OR8K1Q8NGG5 319 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 ZNF507Q8TCN5 953 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 LRRC15Q8TF66 581 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 SUGT1Q9Y2Z0 365 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 LUC7L2Q9Y383 392 aaKnown RBP22.5■■□□□ 1.19
CSPG5-203ENST00000456150 DAGLAQ9Y4D2 1042 aa22.5■■□□□ 1.19
CSPG5-203ENST00000456150 RNF225M0QZC1 329 aaPredicted RBP22.49■■□□□ 1.19
CSPG5-203ENST00000456150 TUBB4BP68371 445 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms