RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 MMP1P03956 469 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ADORA1P30542 326 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 MAGEA9P43362 315 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 CTCFP49711 727 aaPredicted RBP11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 HAND2P61296 217 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TNFAIP1Q13829 316 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SUPT20HL1Q3ZLR7 823 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 HHIPL2Q6UWX4 724 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 APTXQ7Z2E3 356 aaKnown RBP11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SH3RF1Q7Z6J0 888 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TRIM22Q8IYM9 498 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 STK11IPQ8N1F8 1099 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ZNF70Q9UC06 446 aaPredicted RBP11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 ADD3Q9UEY8 706 aaKnown RBP11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 LIMA1Q9UHB6 759 aaKnown RBP11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
CHCHD4P3-201ENST00000455954 TARSL2A2RTX5 802 aaKnown RBP11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 UBE2Q2LH0YL09 131 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 DEXIO95424 95 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CPP00450 1065 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 SLC10A3P09131 477 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CDC27P30260 824 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 TNNT3P45378 269 aaPredicted RBP11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ADKP55263 362 aaKnown RBP11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CUL4BQ13620 913 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 RASA3Q14644 834 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 KARSQ15046 597 aaKnown RBP11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ISM2Q6H9L7 571 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 MOB2Q70IA6 237 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ARMC9Q7Z3E5 817 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 TMTC2Q8N394 836 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 IGSF22Q8N9C0 903 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 IGDCC4Q8TDY8 1250 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ZDHHC15Q96MV8 337 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CLIC6Q96NY7 704 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 GSDMAQ96QA5 445 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 KRT23Q9C075 422 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 LY9Q9HBG7 655 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PDE11AQ9HCR9 933 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 VPS18Q9P253 973 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 SERTAD1Q9UHV2 236 aa11.27□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 RANBP6O60518 1105 aaKnown RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 UQCRFS1P1P0C7P4 283 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 TNNI2P48788 182 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CKAP4Q07065 602 aaKnown RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 GOLGA8FQ08AF8 430 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 GOLGA8DPQ0D2H9 430 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PRKG1Q13976 671 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CASP8Q14790 479 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ZNF569Q5MCW4 686 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 COL13A1Q5TAT6 717 aaPredicted RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 APOBEC3HQ6NTF7 200 aaKnown RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 TMED8Q6PL24 325 aaPredicted RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 RAD9BQ6WBX8 426 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CYB5R4Q7L1T6 521 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 FAM177A1Q8N128 213 aaPredicted RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ANKRD20A12PQ8NF67 263 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PPM1EQ8WY54 764 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 FERMT2Q96AC1 680 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ZIC5Q96T25 663 aa11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PUS7LQ9H0K6 701 aaKnown RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ZCCHC17Q9NP64 241 aaKnown RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 FAM217BQ9NTX9 383 aaPredicted RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PDS5AQ29RF7 1337 aaKnown RBP11.26□□□□□ -0.61
CHCHD4P3-201ENST00000455954 LRRC10BA6NIK2 292 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 SOWAHDA6NJG2 315 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 TCP10L2B9ZVM9 353 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 POLR2DO15514 142 aaKnown RBP11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CA12O43570 354 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PPFIA4O75335 1185 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CLSTN1O94985 981 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ZAP70P43403 619 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 NOP2P46087 812 aaKnown RBP11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CORO7P57737 925 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 AMPD2Q01433 879 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 RBL2Q08999 1139 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 RASGRF1Q13972 1273 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 TMEM67Q5HYA8 995 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 LDLRAD1Q5T700 205 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 NBPF12Q5TAG4 269 aaPredicted RBP11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 NFXL1Q6ZNB6 911 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 RASAL3Q86YV0 1011 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 TBC1D10CQ8IV04 446 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 EFCAB13Q8IY85 973 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 DIS3L2Q8IYB7 885 aaKnown RBP11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 EHBP1Q8NDI1 1231 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 CCDC148Q8NFR7 591 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 PNKPQ96T60 521 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 DESI2Q9BSY9 194 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 ABCB6Q9NP58 842 aa11.25□□□□□ -0.61
CHCHD4P3-201ENST00000455954 SAMSN1Q9NSI8 373 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms