RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 PRPF6O94906 941 aaKnown RBP14.37□□□□□ -0.11
LINC00473-202ENST00000455853 PRLRP16471 622 aa14.37□□□□□ -0.11
LINC00473-202ENST00000455853 PRPHP41219 470 aa14.37□□□□□ -0.11
LINC00473-202ENST00000455853 HERVK_113P62684 666 aa14.37□□□□□ -0.11
LINC00473-202ENST00000455853 COBLL1Q53SF7 1204 aa14.37□□□□□ -0.11
LINC00473-202ENST00000455853 LRRC31Q6UY01 552 aa14.37□□□□□ -0.11
LINC00473-202ENST00000455853 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
LINC00473-202ENST00000455853 IRF2BP1Q8IU81 584 aa14.37□□□□□ -0.11
LINC00473-202ENST00000455853 GIMAP8Q8ND71 665 aaPredicted RBP14.37□□□□□ -0.11
LINC00473-202ENST00000455853 MTRQ99707 1265 aa14.37□□□□□ -0.11
LINC00473-202ENST00000455853 FHDC1Q9C0D6 1143 aaPredicted RBP14.37□□□□□ -0.11
LINC00473-202ENST00000455853 ZBTB1Q9Y2K1 713 aa14.37□□□□□ -0.11
LINC00473-202ENST00000455853 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.37□□□□□ -0.11
LINC00473-202ENST00000455853 RNF225M0QZC1 329 aaPredicted RBP14.36□□□□□ -0.11
LINC00473-202ENST00000455853 USO1O60763 962 aaKnown RBP14.36□□□□□ -0.11
LINC00473-202ENST00000455853 SHOX2O60902 331 aaPredicted RBP14.36□□□□□ -0.11
LINC00473-202ENST00000455853 SYF2O95926 243 aaKnown RBP14.36□□□□□ -0.11
LINC00473-202ENST00000455853 CDC25AP30304 524 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 GNAQP50148 359 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 CORO7P57737 925 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 UBE4AQ14139 1066 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 MSL1Q68DK7 614 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 DTHD1Q6ZMT9 781 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 EFCAB13Q8IY85 973 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 BLIDQ8IZY5 108 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 MMGT1Q8N4V1 131 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 C4orf32Q8N8J7 132 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 DAGLBQ8NCG7 672 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 TRIM58Q8NG06 486 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 CAGE1Q8TC20 777 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 TRIM47Q96LD4 638 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 SUGCTQ9HAC7 445 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 ATP1A1P05023 1023 aaKnown RBP14.36□□□□□ -0.11
LINC00473-202ENST00000455853 MCM7P33993 719 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 EIF5P55010 431 aaKnown RBP14.36□□□□□ -0.11
LINC00473-202ENST00000455853 DNAJC21Q5F1R6 531 aaKnown RBP14.36□□□□□ -0.11
LINC00473-202ENST00000455853 CCNI2Q6ZMN8 369 aaPredicted RBP14.36□□□□□ -0.11
LINC00473-202ENST00000455853 SRBD1Q8N5C6 995 aaKnown RBP14.36□□□□□ -0.11
LINC00473-202ENST00000455853 CCDC155Q8N6L0 562 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 SDR42E1Q8WUS8 393 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 AK8Q96MA6 479 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 MMS19Q96T76 1030 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 TTYH3Q9C0H2 523 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 RSPH14Q9UHP6 348 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 FAM184BQ9ULE4 1060 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 PCDHA4Q9UN74 947 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 KIAA1551Q9HCM1 1747 aa14.36□□□□□ -0.11
LINC00473-202ENST00000455853 CCDC88AQ3V6T2 1871 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 GOLGA8KD6RF30 607 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 WNT7AO00755 349 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 TACC1O75410 805 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 CCNE1P24864 410 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 VAV2P52735 878 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 CHRNDQ07001 517 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 KIF5AQ12840 1032 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 SBK1Q52WX2 424 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 WDR59Q6PJI9 974 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 FAM76AQ8TAV0 307 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 STAMQ92783 540 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 ERGIC2Q96RQ1 377 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 SYT17Q9BSW7 474 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 KBTBD4Q9NVX7 518 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 LCMT1Q9UIC8 334 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 GDAQ9Y2T3 454 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 JRKLQ9Y4A0 524 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 ABCB11O95342 1321 aa14.35□□□□□ -0.11
LINC00473-202ENST00000455853 OPA1O60313 960 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 CPP00450 1065 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 ABL1P00519 1130 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 TRIM21P19474 475 aaKnown RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 UBA7P41226 1012 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 SPA17Q15506 151 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 IL17AQ16552 155 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 TTC31Q49AM3 519 aaPredicted RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 FKBP15Q5T1M5 1219 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 TTI2Q6NXR4 508 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 ARHGAP27Q6ZUM4 889 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 SECISBP2LQ93073 1101 aaKnown RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 CRNKL1Q9BZJ0 848 aaKnown RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 ATP8A2Q9NTI2 1148 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 ARPP21Q9UBL0 812 aaPredicted RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 KLRC4O43908 158 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 TCP1P17987 556 aaKnown RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 TNFRSF8P28908 595 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 HNRNPH3P31942 346 aaKnown RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 AMPD3Q01432 767 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 PPFIA1Q13136 1202 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 ORC2Q13416 577 aaPredicted RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 CAVIN4Q5BKX8 364 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 SUSD4Q5VX71 490 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 IPO4Q8TEX9 1081 aaKnown RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 TUBGCP2Q9BSJ2 902 aa14.34□□□□□ -0.11
LINC00473-202ENST00000455853 NHEJ1Q9H9Q4 299 aaPredicted RBP14.34□□□□□ -0.11
LINC00473-202ENST00000455853 ZC3H4Q9UPT8 1303 aaKnown RBP14.33□□□□□ -0.12
LINC00473-202ENST00000455853 QSER1Q2KHR3 1735 aa14.33□□□□□ -0.12
LINC00473-202ENST00000455853 CCDC194A0A1B0GVG4 234 aa14.33□□□□□ -0.12
LINC00473-202ENST00000455853 PES1O00541 588 aaKnown RBP14.33□□□□□ -0.12
LINC00473-202ENST00000455853 GNPATO15228 680 aa14.33□□□□□ -0.12
LINC00473-202ENST00000455853 FGFR1OPO95684 399 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms