RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 JMJD4Q9H9V9 463 aa18.94■□□□□ 0.62
SMPD4-214ENST00000455548 SENP2Q9HC62 589 aa18.94■□□□□ 0.62
SMPD4-214ENST00000455548 ASB14A6NK59 587 aa18.93■□□□□ 0.62
SMPD4-214ENST00000455548 SH2B2O14492 632 aaPredicted RBP18.93■□□□□ 0.62
SMPD4-214ENST00000455548 TAL1P17542 331 aaPredicted RBP18.93■□□□□ 0.62
SMPD4-214ENST00000455548 LIFRP42702 1097 aa18.93■□□□□ 0.62
SMPD4-214ENST00000455548 NFXL1Q6ZNB6 911 aa18.93■□□□□ 0.62
SMPD4-214ENST00000455548 MAF1Q9H063 256 aa18.93■□□□□ 0.62
SMPD4-214ENST00000455548 VAT1LQ9HCJ6 419 aa18.93■□□□□ 0.62
SMPD4-214ENST00000455548 ABCB11O95342 1321 aa18.93■□□□□ 0.62
SMPD4-214ENST00000455548 LCTP09848 1927 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 BAZ2BQ9UIF8 2168 aaKnown RBP18.92■□□□□ 0.62
SMPD4-214ENST00000455548 CCDC69A6NI79 296 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 NFIBO00712 420 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 DDAH1O94760 285 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 SNAI1O95863 264 aaPredicted RBP18.92■□□□□ 0.62
SMPD4-214ENST00000455548 QRICH1Q2TAL8 776 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 USH1GQ495M9 461 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 ARMCX2Q7L311 632 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 FBXO11Q86XK2 927 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 ZNF654Q8IZM8 581 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 ARRDC4Q8NCT1 418 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 RGS22Q8NE09 1264 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 DIS3LQ8TF46 1054 aaKnown RBP18.92■□□□□ 0.62
SMPD4-214ENST00000455548 CLEC4DQ8WXI8 215 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 NEK1Q96PY6 1258 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 ABHD16BQ9H3Z7 469 aa18.92■□□□□ 0.62
SMPD4-214ENST00000455548 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.92■□□□□ 0.62
SMPD4-214ENST00000455548 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
SMPD4-214ENST00000455548 PTPDC1A2A3K4 754 aa18.91■□□□□ 0.62
SMPD4-214ENST00000455548 SOWAHBA6NEL2 793 aa18.91■□□□□ 0.62
SMPD4-214ENST00000455548 EPB41L2O43491 1005 aaKnown RBP18.91■□□□□ 0.62
SMPD4-214ENST00000455548 HMGB1P09429 215 aaKnown RBP18.91■□□□□ 0.62
SMPD4-214ENST00000455548 ZNF865P0CJ78 1059 aaPredicted RBP18.91■□□□□ 0.62
SMPD4-214ENST00000455548 AKR1A1P14550 325 aa18.91■□□□□ 0.62
SMPD4-214ENST00000455548 KIF5BP33176 963 aa18.91■□□□□ 0.62
SMPD4-214ENST00000455548 MNX1P50219 401 aaPredicted RBP18.91■□□□□ 0.62
SMPD4-214ENST00000455548 BAATQ14032 418 aaPredicted RBP18.91■□□□□ 0.62
SMPD4-214ENST00000455548 PRPF38BQ5VTL8 546 aaKnown RBP18.91■□□□□ 0.62
SMPD4-214ENST00000455548 RASEFQ8IZ41 740 aa18.91■□□□□ 0.62
SMPD4-214ENST00000455548 CTCFLQ8NI51 663 aaPredicted RBP18.91■□□□□ 0.62
SMPD4-214ENST00000455548 MTMR8Q96EF0 704 aa18.91■□□□□ 0.62
SMPD4-214ENST00000455548 C11orf49Q9H6J7 331 aa18.91■□□□□ 0.62
SMPD4-214ENST00000455548 GPHNQ9NQX3 736 aaPredicted RBP18.91■□□□□ 0.62
SMPD4-214ENST00000455548 LOC102724159A0A0B4J2E5 919 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 CALM1P0DP23 149 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 CALM2P0DP24 149 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 CALM3P0DP25 149 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 RARBP10826 455 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 TRAF1Q13077 416 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 ACVR2BQ13705 512 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 PWP2Q15269 919 aaKnown RBP18.9■□□□□ 0.62
SMPD4-214ENST00000455548 RNF207Q6ZRF8 634 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 CCDC144CPQ8IYA2 1237 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 NUP133Q8WUM0 1156 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 DPF3Q92784 378 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 KCNB2Q92953 911 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 AMNQ9BXJ7 453 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 RIOX1Q9H6W3 641 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 ZHX1Q9UKY1 873 aaPredicted RBP18.9■□□□□ 0.62
SMPD4-214ENST00000455548 FAM184BQ9ULE4 1060 aa18.9■□□□□ 0.62
SMPD4-214ENST00000455548 MRPL11Q9Y3B7 192 aaKnown RBP18.9■□□□□ 0.62
SMPD4-214ENST00000455548 ZBTB5O15062 677 aa18.89■□□□□ 0.61
SMPD4-214ENST00000455548 HSPA4P34932 840 aa18.89■□□□□ 0.61
SMPD4-214ENST00000455548 COL9A3Q14050 684 aaPredicted RBP18.89■□□□□ 0.61
SMPD4-214ENST00000455548 ANO1Q5XXA6 986 aa18.89■□□□□ 0.61
SMPD4-214ENST00000455548 DHX32Q7L7V1 743 aaKnown RBP18.89■□□□□ 0.61
SMPD4-214ENST00000455548 SGMS1Q86VZ5 419 aa18.89■□□□□ 0.61
SMPD4-214ENST00000455548 MCF2L2Q86YR7 1114 aa18.89■□□□□ 0.61
SMPD4-214ENST00000455548 LZTS2Q9BRK4 669 aa18.89■□□□□ 0.61
SMPD4-214ENST00000455548 LRRC2Q9BYS8 371 aa18.89■□□□□ 0.61
SMPD4-214ENST00000455548 KBTBD13C9JR72 458 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 DNM1LO00429 736 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 COL6A1P12109 1028 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 CALML3P27482 149 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 GNAQP50148 359 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 RPS6P62753 249 aaKnown RBP18.88■□□□□ 0.61
SMPD4-214ENST00000455548 EXOSC10Q01780 885 aaKnown RBP18.88■□□□□ 0.61
SMPD4-214ENST00000455548 ADCK5Q3MIX3 580 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 SLC30A10Q6XR72 485 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 SYNE3Q6ZMZ3 975 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 MYL10Q9BUA6 226 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 XPNPEP3Q9NQH7 507 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 SLC12A7Q9Y666 1083 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 ALPK3Q96L96 1907 aa18.88■□□□□ 0.61
SMPD4-214ENST00000455548 LRRC37A2A6NM11 1700 aa18.87■□□□□ 0.61
SMPD4-214ENST00000455548 ASTN1O14525 1302 aa18.87■□□□□ 0.61
SMPD4-214ENST00000455548 SMARCA1P28370 1054 aa18.87■□□□□ 0.61
SMPD4-214ENST00000455548 ALDH5A1P51649 535 aaPredicted RBP18.87■□□□□ 0.61
SMPD4-214ENST00000455548 LRRC41Q15345 812 aa18.87■□□□□ 0.61
SMPD4-214ENST00000455548 DNERQ8NFT8 737 aa18.87■□□□□ 0.61
SMPD4-214ENST00000455548 MORC4Q8TE76 937 aa18.87■□□□□ 0.61
SMPD4-214ENST00000455548 MPHOSPH6Q99547 160 aaKnown RBP18.87■□□□□ 0.61
SMPD4-214ENST00000455548 SPZ1Q9BXG8 430 aa18.87■□□□□ 0.61
SMPD4-214ENST00000455548 SNX14Q9Y5W7 946 aa18.87■□□□□ 0.61
SMPD4-214ENST00000455548 NR2E3Q9Y5X4 410 aa18.87■□□□□ 0.61
SMPD4-214ENST00000455548 PNMA6FA0A0J9YX94 578 aa18.86■□□□□ 0.61
SMPD4-214ENST00000455548 B4DLN1 442 aa18.86■□□□□ 0.61
SMPD4-214ENST00000455548 DUSP11O75319 330 aaKnown RBP18.86■□□□□ 0.61
SMPD4-214ENST00000455548 MRPL12P52815 198 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms