RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 RGPD4Q7Z3J3 1758 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 TMEM238LA0A1B0GVL6 79 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 TTC24A2A3L6 582 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 MAFGO15525 162 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 PDE8AO60658 829 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 NTSR2O95665 410 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 SCGB1D2O95969 90 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 AVPP01185 164 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 CELA3AP09093 270 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 IMPDH2P12268 514 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 EDN3P14138 238 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 POU3F3P20264 500 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 INPP5BP32019 993 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 GUCY2FP51841 1108 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 LRRC41Q15345 812 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 TMEM67Q5HYA8 995 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 SLC10A5Q5PT55 438 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 PERM1Q5SV97 790 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 TTC39BQ5VTQ0 682 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 TBC1D9BQ66K14 1250 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 BTLAQ7Z6A9 289 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 C16orf71Q8IYS4 520 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 UBR7Q8N806 425 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 NAP1L4Q99733 375 aaKnown RBP6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 LRRCC1Q9C099 1032 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 TNKS2Q9H2K2 1166 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 SFMBT1Q9UHJ3 866 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 PA2G4Q9UQ80 394 aaKnown RBP6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 KCNMB2Q9Y691 235 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 SH3TC1Q8TE82 1336 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 USP42Q9H9J4 1324 aaKnown RBP6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 C4AP0C0L4 1744 aa6.22□□□□□ -1.41
HMGB1P4-201ENST00000455362 SCN7AQ01118 1682 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 SHTN1A0MZ66 631 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 FAM177BA6PVY3 158 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 SPATA31C2B4DYI2 1134 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 GYS1P13807 737 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 CPEP16870 476 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 TFE3P19532 575 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 PHKA2P46019 1235 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 G3BP1Q13283 466 aaKnown RBP eCLIP6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 EZH2Q15910 746 aaKnown RBP6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 AGMOQ6ZNB7 445 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 CHPFQ8IZ52 775 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 ZNF280CQ8ND82 737 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 TTLL11Q8NHH1 800 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 FBXO27Q8NI29 283 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 KLHDC4Q8TBB5 520 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 OTUD7AQ8TE49 926 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 HSH2DQ96JZ2 352 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 SCYL1Q96KG9 808 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 LRRC3Q9BY71 257 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 TFCP2L1Q9NZI6 479 aa6.21□□□□□ -1.42
HMGB1P4-201ENST00000455362 XYLBO75191 536 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 DGAT1O75907 488 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 SASH1O94885 1247 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 BPNT1O95861 308 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 FOSP01100 380 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 TIMP2P16035 220 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 TM4SF1P30408 202 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 CTSWP56202 376 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 MCL1Q07820 350 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 IFIT5Q13325 482 aaKnown RBP6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 NFIXQ14938 502 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 ZNF827Q17R98 1081 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 CCDC57Q2TAC2 916 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 WDR44Q5JSH3 913 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 GK5Q6ZS86 529 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 C14orf80Q86SX3 495 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 COL23A1Q86Y22 540 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 ERC1Q8IUD2 1116 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 FAM178BQ8IXR5 827 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 CYP4X1Q8N118 509 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 NME8Q8N427 588 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 MEIOBQ8N635 442 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 FLAD1Q8NFF5 587 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 ZNF669Q96BR6 464 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 KIF1BPQ96EK5 621 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 KLF16Q9BXK1 252 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 NYXQ9GZU5 481 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 SIL1Q9H173 461 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 LIN7BQ9HAP6 207 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 ABCB6Q9NP58 842 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 IL1RAPL2Q9NP60 686 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 C11orf16Q9NQ32 467 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 LATS2Q9NRM7 1088 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 TUBGCP6Q96RT7 1819 aa6.2□□□□□ -1.42
HMGB1P4-201ENST00000455362 DDX60Q8IY21 1712 aaKnown RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 A0A087X0B3 334 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 B2RBV5 119 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 EYA2O00167 538 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 IFRD1O00458 451 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 CIAO1O76071 339 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 F13A1P00488 732 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 IL15P40933 162 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 BAG6P46379 1132 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 VEGFBP49765 207 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 RAB27AP51159 221 aa6.19□□□□□ -1.42
HMGB1P4-201ENST00000455362 PDE1AP54750 535 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms