RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 WDR46O15213 610 aaKnown RBP24.26■■□□□ 1.47
CTU2-202ENST00000453996 POLR2DO15514 142 aaKnown RBP24.26■■□□□ 1.47
CTU2-202ENST00000453996 NEMFO60524 1076 aa24.26■■□□□ 1.47
CTU2-202ENST00000453996 LONP1P36776 959 aaKnown RBP24.26■■□□□ 1.47
CTU2-202ENST00000453996 PRPHP41219 470 aa24.26■■□□□ 1.47
CTU2-202ENST00000453996 TMEM60Q9H2L4 133 aa24.26■■□□□ 1.47
CTU2-202ENST00000453996 RANBP17Q9H2T7 1088 aaKnown RBP24.26■■□□□ 1.47
CTU2-202ENST00000453996 PICK1Q9NRD5 415 aa24.26■■□□□ 1.47
CTU2-202ENST00000453996 GPR162Q16538 588 aa24.25■■□□□ 1.47
CTU2-202ENST00000453996 IL17AQ16552 155 aa24.25■■□□□ 1.47
CTU2-202ENST00000453996 UVSSAQ2YD98 709 aa24.25■■□□□ 1.47
CTU2-202ENST00000453996 DTHD1Q6ZMT9 781 aa24.25■■□□□ 1.47
CTU2-202ENST00000453996 ELOA2Q8IYF1 753 aaPredicted RBP24.25■■□□□ 1.47
CTU2-202ENST00000453996 EPSTI1Q96J88 318 aa24.25■■□□□ 1.47
CTU2-202ENST00000453996 AS3MTQ9HBK9 375 aa24.25■■□□□ 1.47
CTU2-202ENST00000453996 PHIPQ8WWQ0 1821 aa24.24■■□□□ 1.47
CTU2-202ENST00000453996 MCTP2Q6DN12 878 aa24.24■■□□□ 1.47
CTU2-202ENST00000453996 FAM200AQ8TCP9 573 aa24.24■■□□□ 1.47
CTU2-202ENST00000453996 ERCC4Q92889 916 aaPredicted RBP24.24■■□□□ 1.47
CTU2-202ENST00000453996 ZKSCAN4Q969J2 545 aaPredicted RBP24.24■■□□□ 1.47
CTU2-202ENST00000453996 DCPSQ96C86 337 aaKnown RBP24.24■■□□□ 1.47
CTU2-202ENST00000453996 L3MBTL3Q96JM7 780 aaPredicted RBP24.24■■□□□ 1.47
CTU2-202ENST00000453996 HOOK1Q9UJC3 728 aaKnown RBP24.24■■□□□ 1.47
CTU2-202ENST00000453996 SRCAPQ6ZRS2 3230 aa24.24■■□□□ 1.47
CTU2-202ENST00000453996 CAVIN2O95810 425 aa24.24■■□□□ 1.47
CTU2-202ENST00000453996 OR52Z1P0C646 297 aa24.24■■□□□ 1.47
CTU2-202ENST00000453996 PDILTQ8N807 584 aa24.24■■□□□ 1.47
CTU2-202ENST00000453996 KLRG1Q96E93 195 aa24.24■■□□□ 1.47
CTU2-202ENST00000453996 WDR18Q9BV38 432 aa24.24■■□□□ 1.47
CTU2-202ENST00000453996 ZC3H4Q9UPT8 1303 aaKnown RBP24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L15C9J2P7 530 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L13C9JLJ4 530 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L11C9JVI0 530 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L18D6R9N7 530 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L22D6RA61 530 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L17D6RBQ6 530 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L19D6RCP7 530 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L20D6RJB6 530 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP14P54578 494 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L24Q0WX57 530 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 AP3B2Q13367 1082 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 MTMR2Q13614 643 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 ZRSR1Q15695 479 aaKnown RBP24.23■■□□□ 1.47
CTU2-202ENST00000453996 USP17L6PQ6QN14 398 aa24.23■■□□□ 1.47
CTU2-202ENST00000453996 PTPRAP18433 802 aa24.22■■□□□ 1.47
CTU2-202ENST00000453996 KANK3Q6NY19 840 aa24.22■■□□□ 1.47
CTU2-202ENST00000453996 SULF1Q8IWU6 871 aa24.22■■□□□ 1.47
CTU2-202ENST00000453996 DNAJC25Q9H1X3 360 aa24.22■■□□□ 1.47
CTU2-202ENST00000453996 FBXO28Q9NVF7 368 aa24.22■■□□□ 1.47
CTU2-202ENST00000453996 ANO10Q9NW15 660 aa24.22■■□□□ 1.47
CTU2-202ENST00000453996 SERTAD1Q9UHV2 236 aa24.22■■□□□ 1.47
CTU2-202ENST00000453996 FZD1Q9UP38 647 aa24.22■■□□□ 1.47
CTU2-202ENST00000453996 MEIS2O14770 477 aa24.21■■□□□ 1.47
CTU2-202ENST00000453996 ACTN4O43707 911 aaKnown RBP24.21■■□□□ 1.47
CTU2-202ENST00000453996 TXLNAP40222 546 aa24.21■■□□□ 1.47
CTU2-202ENST00000453996 CCDC174Q6PII3 467 aa24.21■■□□□ 1.47
CTU2-202ENST00000453996 TEX2Q8IWB9 1127 aa24.21■■□□□ 1.47
CTU2-202ENST00000453996 PYM1Q9BRP8 204 aaKnown RBP24.21■■□□□ 1.47
CTU2-202ENST00000453996 NOL9Q5SY16 702 aaKnown RBP24.21■■□□□ 1.47
CTU2-202ENST00000453996 ZNF280CQ8ND82 737 aa24.21■■□□□ 1.47
CTU2-202ENST00000453996 CCDC34Q96HJ3 373 aa24.21■■□□□ 1.47
CTU2-202ENST00000453996 NAP1L4Q99733 375 aaKnown RBP24.21■■□□□ 1.47
CTU2-202ENST00000453996 SLF1Q9BQI6 1058 aa24.21■■□□□ 1.47
CTU2-202ENST00000453996 ANO3Q9BYT9 981 aa24.21■■□□□ 1.47
CTU2-202ENST00000453996 USP25Q9UHP3 1055 aa24.21■■□□□ 1.47
CTU2-202ENST00000453996 A0A087X0B3 334 aa24.2■■□□□ 1.46
CTU2-202ENST00000453996 TDP2O95551 362 aa24.2■■□□□ 1.46
CTU2-202ENST00000453996 SPP2Q13103 211 aa24.2■■□□□ 1.46
CTU2-202ENST00000453996 PNOCQ13519 176 aa24.2■■□□□ 1.46
CTU2-202ENST00000453996 PPP4R3AQ6IN85 833 aa24.2■■□□□ 1.46
CTU2-202ENST00000453996 SAMD1Q6SPF0 538 aaPredicted RBP24.2■■□□□ 1.46
CTU2-202ENST00000453996 USP50Q70EL3 339 aaPredicted RBP24.2■■□□□ 1.46
CTU2-202ENST00000453996 POTEDQ86YR6 584 aa24.2■■□□□ 1.46
CTU2-202ENST00000453996 DHX58Q96C10 678 aa24.2■■□□□ 1.46
CTU2-202ENST00000453996 TUBE1Q9UJT0 475 aa24.2■■□□□ 1.46
CTU2-202ENST00000453996 PAPPA2Q9BXP8 1791 aa24.2■■□□□ 1.46
CTU2-202ENST00000453996 SCN4AP35499 1836 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 PARP14Q460N5 1801 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 GRIN3BO60391 1043 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 GCFC2P16383 781 aaKnown RBP24.19■■□□□ 1.46
CTU2-202ENST00000453996 TAL1P17542 331 aaPredicted RBP24.19■■□□□ 1.46
CTU2-202ENST00000453996 VCAM1P19320 739 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 ZNF165P49910 485 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 BACE1P56817 501 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 PRPF38AQ8NAV1 312 aaKnown RBP24.19■■□□□ 1.46
CTU2-202ENST00000453996 TANGO6Q9C0B7 1094 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 EMILIN3Q9NT22 766 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 SMCHD1A6NHR9 2005 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 OTOFQ9HC10 1997 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 ADM5C9JUS6 153 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 OPLAHO14841 1288 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 EDIL3O43854 480 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 FOSP01100 380 aaPredicted RBP24.19■■□□□ 1.46
CTU2-202ENST00000453996 CCDC173Q0VFZ6 552 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 POSTNQ15063 836 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 CALCRLQ16602 461 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 CEP57L1Q8IYX8 460 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.19■■□□□ 1.466e-7■■■■■ 32.1
CTU2-202ENST00000453996 AK8Q96MA6 479 aa24.19■■□□□ 1.46
CTU2-202ENST00000453996 CBX8Q9HC52 389 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms