RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 SOWAHBA6NEL2 793 aa21.66■■□□□ 1.06
PDLIM2-214ENST00000452226 ASB14A6NK59 587 aa21.66■■□□□ 1.06
PDLIM2-214ENST00000452226 SLC16A2P36021 539 aa21.66■■□□□ 1.06
PDLIM2-214ENST00000452226 C9orf50Q5SZB4 431 aa21.66■■□□□ 1.06
PDLIM2-214ENST00000452226 TTBK2Q6IQ55 1244 aa21.66■■□□□ 1.06
PDLIM2-214ENST00000452226 PCSK9Q8NBP7 692 aaKnown RBP21.66■■□□□ 1.06
PDLIM2-214ENST00000452226 UPF3AQ9H1J1 476 aaKnown RBP21.66■■□□□ 1.06
PDLIM2-214ENST00000452226 IL25Q9H293 177 aa21.66■■□□□ 1.06
PDLIM2-214ENST00000452226 TMEM39AQ9NV64 488 aa21.66■■□□□ 1.06
PDLIM2-214ENST00000452226 DCDC2CA8MYV0 355 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 KIAA0355O15063 1070 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 ICAM1P05362 532 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 RAG1P15918 1043 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 ITGB8P26012 769 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 CHMLP26374 656 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 GJA9P57773 515 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 GNASQ5JWF2 1037 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 BTNL9Q6UXG8 535 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 MFSD6Q6ZSS7 791 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 ANKRD33Q7Z3H0 272 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 GLT1D1Q96MS3 346 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 TOX2Q96NM4 488 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 RANBP17Q9H2T7 1088 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 CYP39A1Q9NYL5 469 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 LCTP09848 1927 aa21.65■■□□□ 1.06
PDLIM2-214ENST00000452226 ELP1O95163 1332 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 FRMPD2Q68DX3 1309 aaPredicted RBP21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 ASGR1P07306 291 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 TNFAIP2Q03169 654 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 FAAP100Q0VG06 881 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 AKNAD1Q5T1N1 836 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 SYDE2Q5VT97 1194 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 NSMFQ6X4W1 530 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 NOL8Q76FK4 1167 aaKnown RBP21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 VTI1AQ96AJ9 217 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 DSCC1Q9BVC3 393 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 GPCPD1Q9NPB8 672 aa21.64■■□□□ 1.05
PDLIM2-214ENST00000452226 CUL9Q8IWT3 2517 aa21.63■■□□□ 1.05
PDLIM2-214ENST00000452226 ASTN1O14525 1302 aa21.63■■□□□ 1.05
PDLIM2-214ENST00000452226 RAD50Q92878 1312 aa21.63■■□□□ 1.05
PDLIM2-214ENST00000452226 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.63■■□□□ 1.05
PDLIM2-214ENST00000452226 PCP11498 1178 aaKnown RBP21.63■■□□□ 1.05
PDLIM2-214ENST00000452226 TBC1D10CQ8IV04 446 aa21.63■■□□□ 1.05
PDLIM2-214ENST00000452226 CCDC136Q96JN2 1154 aa21.63■■□□□ 1.05
PDLIM2-214ENST00000452226 DDX49Q9Y6V7 483 aaKnown RBP21.63■■□□□ 1.05
PDLIM2-214ENST00000452226 LRRC37A2A6NM11 1700 aa21.63■■□□□ 1.05
PDLIM2-214ENST00000452226 NEFLP07196 543 aa21.62■■□□□ 1.05
PDLIM2-214ENST00000452226 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
PDLIM2-214ENST00000452226 PDHBP11177 359 aa21.62■■□□□ 1.05
PDLIM2-214ENST00000452226 FAM161BQ96MY7 647 aa21.62■■□□□ 1.05
PDLIM2-214ENST00000452226 TTC14Q96N46 770 aa21.62■■□□□ 1.05
PDLIM2-214ENST00000452226 RNF41Q9H4P4 317 aaPredicted RBP21.62■■□□□ 1.05
PDLIM2-214ENST00000452226 CTAGE5O15320 804 aa21.61■■□□□ 1.05
PDLIM2-214ENST00000452226 BEX3Q00994 111 aa21.61■■□□□ 1.05
PDLIM2-214ENST00000452226 SKAP1Q86WV1 359 aa21.61■■□□□ 1.05
PDLIM2-214ENST00000452226 LAMA4Q16363 1823 aa21.61■■□□□ 1.05
PDLIM2-214ENST00000452226 MROH7Q68CQ1 1323 aa21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 A0A0U1RQG5 324 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 CDK7P50613 346 aa21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 EPHB4P54760 987 aa21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 NKX3-2P78367 333 aa21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 FPGSQ05932 587 aa21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 EEPD1Q7L9B9 569 aa21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 RUFY2Q8WXA3 655 aa21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 ESR2Q92731 530 aa21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 PURBQ96QR8 312 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 GNEQ9Y223 722 aaKnown RBP21.6■■□□□ 1.05
PDLIM2-214ENST00000452226 NEDD4P46934 1319 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 ARVCFO00192 962 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 NFIBO00712 420 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 ZNF213O14771 459 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 SMAD3P84022 425 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 ZNF543Q08ER8 600 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 BAATQ14032 418 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 TLK2Q86UE8 772 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 FBXO16Q8IX29 292 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 GUCD1Q96NT3 240 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 AP5M1Q9H0R1 490 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 PDGFCQ9NRA1 345 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 TBX21Q9UL17 535 aa21.59■■□□□ 1.05
PDLIM2-214ENST00000452226 SGSM2O43147 1006 aa21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 TIMP1P01033 207 aa21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 SMPD1P17405 629 aa21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 BMP2KLQ5H9B9 411 aa21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 ERICH6BQ5W0A0 696 aa21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 IQSEC1Q6DN90 963 aa21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 TAPT1Q6NXT6 567 aa21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 RNPC3Q96LT9 517 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 ZKSCAN3Q9BRR0 538 aa21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 VTA1Q9NP79 307 aa21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 ADD3Q9UEY8 706 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-214ENST00000452226 PTPDC1A2A3K4 754 aa21.57■■□□□ 1.04
PDLIM2-214ENST00000452226 DYNC1LI2O43237 492 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-214ENST00000452226 SNHG28P0DPA3 235 aa21.57■■□□□ 1.04
PDLIM2-214ENST00000452226 PTGS1P23219 599 aa21.57■■□□□ 1.04
PDLIM2-214ENST00000452226 FSCN1Q16658 493 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-214ENST00000452226 CXCL17Q6UXB2 119 aa21.57■■□□□ 1.04
PDLIM2-214ENST00000452226 MORC4Q8TE76 937 aa21.57■■□□□ 1.04
PDLIM2-214ENST00000452226 CTNNA3Q9UI47 895 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms