RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 GNASQ5JWF2 1037 aa12.9□□□□□ -0.34
USP1-204ENST00000452143 CCDC129Q6ZRS4 1044 aa12.9□□□□□ -0.34
USP1-204ENST00000452143 FAM126BQ8IXS8 530 aa12.9□□□□□ -0.34
USP1-204ENST00000452143 OTUD7AQ8TE49 926 aaPredicted RBP12.9□□□□□ -0.34
USP1-204ENST00000452143 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
USP1-204ENST00000452143 ANAPC4Q9UJX5 808 aa12.9□□□□□ -0.34
USP1-204ENST00000452143 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.34
USP1-204ENST00000452143 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.89□□□□□ -0.35
USP1-204ENST00000452143 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.89□□□□□ -0.35
USP1-204ENST00000452143 ARVCFO00192 962 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 CTAGE5O15320 804 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 FOXP2O15409 715 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 CABYRO75952 493 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 MCCP23508 829 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 DNAJB2P25686 324 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 TNFAIP2Q03169 654 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 RCSD1Q6JBY9 416 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 PSRC1Q6PGN9 363 aaPredicted RBP12.89□□□□□ -0.35
USP1-204ENST00000452143 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 TMEM199Q8N511 208 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 MYLIPQ8WY64 445 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 AGBL1Q96MI9 1066 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 TRERF1Q96PN7 1200 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 SEZ6LQ9BYH1 1024 aa12.89□□□□□ -0.35
USP1-204ENST00000452143 ZMYM6O95789 1325 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 MUC3AQ02505 3323 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 ORC4O43929 436 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 ALAS1P13196 640 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 NOVP48745 357 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
USP1-204ENST00000452143 TLK2Q86UE8 772 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 DCAF4Q8WV16 495 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 VTI1AQ96AJ9 217 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 EVI5LQ96CN4 794 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.88□□□□□ -0.355e-6■■■□□ 16.3
USP1-204ENST00000452143 IL17RBQ9NRM6 502 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 CYP39A1Q9NYL5 469 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
USP1-204ENST00000452143 PRR12Q9ULL5 1215 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 GNEQ9Y223 722 aaKnown RBP12.88□□□□□ -0.35
USP1-204ENST00000452143 GBF1Q92538 1859 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 ASTN1O14525 1302 aa12.88□□□□□ -0.35
USP1-204ENST00000452143 LOC102724159A0A0B4J2E5 919 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.87□□□□□ -0.35
USP1-204ENST00000452143 SOWAHBA6NEL2 793 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 CD4P01730 458 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 ICAM1P05362 532 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 FGRP09769 529 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 PWP2Q15269 919 aaKnown RBP12.87□□□□□ -0.35
USP1-204ENST00000452143 RASIP1Q5U651 963 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 KCTD1Q719H9 257 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 SLC43A3Q8NBI5 491 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 TIFAQ96CG3 184 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 VTA1Q9NP79 307 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 CCPG1Q9ULG6 757 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 Q9Y3F1 56 aa12.87□□□□□ -0.35
USP1-204ENST00000452143 ZEB2O60315 1214 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 RANBP6O60518 1105 aaKnown RBP12.86□□□□□ -0.35
USP1-204ENST00000452143 NMT2O60551 498 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 CSF2RAP15509 400 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 BEX3Q00994 111 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 ALX1Q15699 326 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 FSCN1Q16658 493 aaKnown RBP12.86□□□□□ -0.35
USP1-204ENST00000452143 CCDC96Q2M329 555 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 TMEM240Q5SV17 173 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 NOL8Q76FK4 1167 aaKnown RBP12.86□□□□□ -0.35
USP1-204ENST00000452143 MORC4Q8TE76 937 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 AP5M1Q9H0R1 490 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 MTIF3Q9H2K0 278 aaKnown RBP12.86□□□□□ -0.35
USP1-204ENST00000452143 RANBP17Q9H2T7 1088 aaKnown RBP12.86□□□□□ -0.35
USP1-204ENST00000452143 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 PNMA2Q9UL42 364 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 TRANK1O15050 2925 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 CHD7Q9P2D1 2997 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 MYO9BQ13459 2157 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 NCOR1O75376 2440 aa12.86□□□□□ -0.35
USP1-204ENST00000452143 BDP1A6H8Y1 2624 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 SMPD1P17405 629 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 MUM1L1Q5H9M0 696 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 VPS53Q5VIR6 699 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 IQSEC1Q6DN90 963 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 TAPT1Q6NXT6 567 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 CXCL17Q6UXB2 119 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 BTNL9Q6UXG8 535 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 C16orf59Q7L2K0 433 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 FBXO16Q8IX29 292 aaPredicted RBP12.85□□□□□ -0.35
USP1-204ENST00000452143 PPP1R12CQ9BZL4 782 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 ZNF576Q9H609 170 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 ADD3Q9UEY8 706 aaKnown RBP12.85□□□□□ -0.35
USP1-204ENST00000452143 TANC1Q9C0D5 1861 aa12.85□□□□□ -0.35
USP1-204ENST00000452143 SCN10AQ9Y5Y9 1956 aa12.84□□□□□ -0.35
USP1-204ENST00000452143 TOP1P11387 765 aaKnown RBP12.84□□□□□ -0.35
USP1-204ENST00000452143 PCP11498 1178 aaKnown RBP12.84□□□□□ -0.35
USP1-204ENST00000452143 PDE1AP54750 535 aa12.84□□□□□ -0.35
USP1-204ENST00000452143 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
USP1-204ENST00000452143 ITGA7Q13683 1181 aa12.84□□□□□ -0.35
USP1-204ENST00000452143 GRIN2CQ14957 1233 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms