RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 CYP27A1Q02318 531 aa12.9□□□□□ -0.34
TNXB-203ENST00000451343 FOXR1Q6PIV2 292 aa12.9□□□□□ -0.34
TNXB-203ENST00000451343 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
TNXB-203ENST00000451343 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
TNXB-203ENST00000451343 HNRNPLLQ8WVV9 542 aaKnown RBP12.9□□□□□ -0.34
TNXB-203ENST00000451343 NCAPGQ9BPX3 1015 aa12.9□□□□□ -0.34
TNXB-203ENST00000451343 BSDC1Q9NW68 430 aaPredicted RBP12.9□□□□□ -0.34
TNXB-203ENST00000451343 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
TNXB-203ENST00000451343 GNPATO15228 680 aa12.89□□□□□ -0.35
TNXB-203ENST00000451343 ZNF185O15231 689 aa12.89□□□□□ -0.35
TNXB-203ENST00000451343 LONP1P36776 959 aaKnown RBP12.89□□□□□ -0.35
TNXB-203ENST00000451343 UBA7P41226 1012 aa12.89□□□□□ -0.35
TNXB-203ENST00000451343 TRAPPC10P48553 1259 aa12.89□□□□□ -0.35
TNXB-203ENST00000451343 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
TNXB-203ENST00000451343 PCDHA4Q9UN74 947 aa12.89□□□□□ -0.35
TNXB-203ENST00000451343 WNK3Q9BYP7 1800 aa12.89□□□□□ -0.35
TNXB-203ENST00000451343 CYTH3O43739 400 aa12.89□□□□□ -0.35
TNXB-203ENST00000451343 MRPS25P82663 173 aaKnown RBP12.89□□□□□ -0.35
TNXB-203ENST00000451343 CCDC178Q5BJE1 867 aa12.89□□□□□ -0.35
TNXB-203ENST00000451343 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
TNXB-203ENST00000451343 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 H7C1D1 291 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 FBXO33Q7Z6M2 555 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 KIAA1328Q86T90 577 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 ZNF507Q8TCN5 953 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 SMCR8Q8TEV9 937 aaPredicted RBP12.88□□□□□ -0.35
TNXB-203ENST00000451343 EXOC4Q96A65 974 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 PCDHA6Q9UN73 950 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 PCDHA8Q9Y5H6 950 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 RASSF10A6NK89 507 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 FCER1AP12319 257 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 KIF5BP33176 963 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 TRIM14Q14142 442 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 VPS72Q15906 364 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 DNAJC21Q5F1R6 531 aaKnown RBP12.88□□□□□ -0.35
TNXB-203ENST00000451343 TRAPPC11Q7Z392 1133 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 CSGALNACT2Q8N6G5 542 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 RIN2Q8WYP3 895 aaPredicted RBP12.88□□□□□ -0.35
TNXB-203ENST00000451343 DUSP9Q99956 384 aaKnown RBP12.88□□□□□ -0.35
TNXB-203ENST00000451343 PLEKHA4Q9H4M7 779 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 A0A1B0GUL6 1792 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 TRIM66O15016 1216 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 PLCG1P19174 1290 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 TRIM21P19474 475 aaKnown RBP12.88□□□□□ -0.35
TNXB-203ENST00000451343 HIBADHP31937 336 aaKnown RBP12.88□□□□□ -0.35
TNXB-203ENST00000451343 DIXDC1Q155Q3 683 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 GRIK5Q16478 980 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
TNXB-203ENST00000451343 TTI2Q6NXR4 508 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 KRT26Q7Z3Y9 468 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 OTUD6BQ8N6M0 293 aa12.88□□□□□ -0.35
TNXB-203ENST00000451343 PLEKP08567 350 aaPredicted RBP12.87□□□□□ -0.35
TNXB-203ENST00000451343 CALML3P27482 149 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 STK4Q13043 487 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 TBC1D9BQ66K14 1250 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 JAKMIP2Q96AA8 810 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 DRC1Q96MC2 740 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 GPR101Q96P66 508 aaPredicted RBP12.87□□□□□ -0.35
TNXB-203ENST00000451343 DNAJC7Q99615 494 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 TUBGCP2Q9BSJ2 902 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 MAGEC2Q9UBF1 373 aaPredicted RBP12.87□□□□□ -0.35
TNXB-203ENST00000451343 SAP30BPQ9UHR5 308 aaKnown RBP12.87□□□□□ -0.35
TNXB-203ENST00000451343 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
TNXB-203ENST00000451343 AFF2P51816 1311 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 PDS5AQ29RF7 1337 aaKnown RBP12.87□□□□□ -0.35
TNXB-203ENST00000451343 PSMA7O14818 248 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.87□□□□□ -0.35
TNXB-203ENST00000451343 DZIP1Q86YF9 867 aaKnown RBP12.87□□□□□ -0.35
TNXB-203ENST00000451343 PIK3R5Q8WYR1 880 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 MAD2L2Q9UI95 211 aa12.87□□□□□ -0.35
TNXB-203ENST00000451343 PDE2AO00408 941 aaPredicted RBP12.86□□□□□ -0.35
TNXB-203ENST00000451343 EIF3JO75822 258 aaKnown RBP12.86□□□□□ -0.35
TNXB-203ENST00000451343 MYBL2P10244 700 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 TBC1D8BQ0IIM8 1120 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
TNXB-203ENST00000451343 SKIDA1Q1XH10 827 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
TNXB-203ENST00000451343 LETM2Q2VYF4 491 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 ANKRD40Q6AI12 368 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
TNXB-203ENST00000451343 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
TNXB-203ENST00000451343 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
TNXB-203ENST00000451343 CAPN11Q9UMQ6 739 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 ZNF652Q9Y2D9 606 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 PCP11498 1178 aaKnown RBP12.86□□□□□ -0.35
TNXB-203ENST00000451343 PDE4DQ08499 809 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 TXNRD1Q16881 649 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 CCDC148Q8NFR7 591 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 CERKQ8TCT0 537 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 CNOT6LQ96LI5 555 aaKnown RBP12.86□□□□□ -0.35
TNXB-203ENST00000451343 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 MKNK2Q9HBH9 465 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 VAT1LQ9HCJ6 419 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 ATP8A2Q9NTI2 1148 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 MYO1AQ9UBC5 1043 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 SAR1BQ9Y6B6 198 aa12.86□□□□□ -0.35
TNXB-203ENST00000451343 ANKRD65E5RJM6 399 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms