RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 HOMER2Q9NSB8 354 aa15.18■□□□□ 0.02
SNRNP27-203ENST00000450162 RBM28Q9NW13 759 aaKnown RBP15.18■□□□□ 0.02
SNRNP27-203ENST00000450162 CYP46A1Q9Y6A2 500 aa15.18■□□□□ 0.02
SNRNP27-203ENST00000450162 ABCB11O95342 1321 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 PLXNB2O15031 1838 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 LOC102724159A0A0B4J2E5 919 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 POTEB2H3BUK9 544 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 PGK2P07205 417 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 PRKAR2AP13861 404 aaKnown RBP15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 CASTP20810 708 aaKnown RBP15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 RGS19P49795 217 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 PWP2Q15269 919 aaKnown RBP15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 MTFR1Q15390 333 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 CCL14Q16627 93 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 QRICH1Q2TAL8 776 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 APOA5Q6Q788 366 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 MAMDC4Q6UXC1 1216 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 SAMD3Q8N6K7 520 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 AGXT2Q9BYV1 514 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 VAT1LQ9HCJ6 419 aa15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 A1CFQ9NQ94 594 aaKnown RBP15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 PAK6Q9NQU5 681 aaPredicted RBP15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 MRPL11Q9Y3B7 192 aaKnown RBP15.17■□□□□ 0.02
SNRNP27-203ENST00000450162 PNMA6FA0A0J9YX94 578 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 CCDC196A0A1B0GTZ2 297 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 ZBTB43O43298 467 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 MSCO60682 206 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 GJA8P48165 433 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 CACNB2Q08289 660 aaPredicted RBP15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 COL9A3Q14050 684 aaPredicted RBP15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 IL17RAQ96F46 866 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 TINF2Q9BSI4 451 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 CPVLQ9H3G5 476 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 MAP3K20Q9NYL2 800 aaKnown RBP15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 CYP39A1Q9NYL5 469 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 FLRT1Q9NZU1 646 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 SYNGAP1Q96PV0 1343 aa15.16■□□□□ 0.02
SNRNP27-203ENST00000450162 ASB14A6NK59 587 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 SGPL1O95470 568 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 EVCP57679 992 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 MUM1L1Q5H9M0 696 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 NSMFQ6X4W1 530 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 Q6ZUG5 572 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 FAM133AQ8N9E0 248 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 CLEC4DQ8WXI8 215 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 RRP36Q96EU6 259 aaKnown RBP15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 TCEANC2Q96MN5 208 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 MYL10Q9BUA6 226 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 ADD3Q9UEY8 706 aaKnown RBP15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 CNPY2Q9Y2B0 182 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 HTTP42858 3142 aa15.15■□□□□ 0.02
SNRNP27-203ENST00000450162 KLF18A0A0U1RQI7 1052 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 B4DLN1 442 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 CYTH3O43739 400 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 CYP2C19P33261 490 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 MRPL12P52815 198 aaKnown RBP15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 SOX10P56693 466 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 TRIM32Q13049 653 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 USH1GQ495M9 461 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 RNF207Q6ZRF8 634 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 MICU3Q86XE3 530 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 U2AF1L4Q8WU68 220 aaKnown RBP15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 BRF1Q92994 677 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 PIGSQ96S52 555 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 MPHOSPH6Q99547 160 aaKnown RBP15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 SEC63Q9UGP8 760 aaKnown RBP15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 BRPF3Q9ULD4 1205 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 PCDHA1Q9Y5I3 950 aa15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 KIAA0100Q14667 2235 aaKnown RBP15.14■□□□□ 0.01
SNRNP27-203ENST00000450162 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 POTEFA5A3E0 1075 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 NFIBO00712 420 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 MYCP01106 439 aaPredicted RBP15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 CYBAP13498 195 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 BAATQ14032 418 aaPredicted RBP15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 RTN1Q16799 776 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 C8orf34Q49A92 452 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 TMTC3Q6ZXV5 915 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 HOMER1Q86YM7 354 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 DNERQ8NFT8 737 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 DEFB118Q96PH6 123 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 ALDH8A1Q9H2A2 487 aaPredicted RBP15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 ABHD16BQ9H3Z7 469 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
SNRNP27-203ENST00000450162 ZNFX1Q9P2E3 1918 aaKnown RBP15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 GOLGA8AA7E2F4 631 aa15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 GOLGA8BA8MQT2 603 aa15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 SEPT4O43236 478 aa15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 CPA1P15085 419 aa15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 METAP2P50579 478 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 RPS6P62753 249 aaKnown RBP15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 GHRHRQ02643 423 aa15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 SLC35G1Q2M3R5 365 aa15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 TEX2Q8IWB9 1127 aa15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 SRBD1Q8N5C6 995 aaKnown RBP15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 ANKLE1Q8NAG6 615 aa15.12■□□□□ 0.01
SNRNP27-203ENST00000450162 CRISPLD2Q9H0B8 497 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms