RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SMC6Q96SB8 1091 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 AMNQ9BXJ7 453 aa11.47□□□□□ -0.57
CTC1-202ENST00000449476 FOSP01100 380 aaPredicted RBP11.46□□□□□ -0.57
CTC1-202ENST00000449476 POLR2MP0CAP2 368 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 MECOMQ03112 1051 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 MTMR3Q13615 1198 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 ZSCAN26Q16670 478 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 SARM1Q6SZW1 724 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 MRRFQ96E11 262 aaKnown RBP11.46□□□□□ -0.57
CTC1-202ENST00000449476 PDLIM2Q96JY6 352 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 CABS1Q96KC9 395 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 PIGSQ96S52 555 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 MRPL11Q9Y3B7 192 aaKnown RBP11.46□□□□□ -0.57
CTC1-202ENST00000449476 NOP56O00567 594 aaKnown RBP11.46□□□□□ -0.57
CTC1-202ENST00000449476 ALAS1P13196 640 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 TNNI1P19237 187 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 CLUL1Q15846 466 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 USP17L2Q6R6M4 530 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 PLA2G4DQ86XP0 818 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 ZNF354CQ86Y25 554 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 NIM1KQ8IY84 436 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 RAB17Q9H0T7 212 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 SPTLC3Q9NUV7 552 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 SWAP70Q9UH65 585 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 SERPINB13Q9UIV8 391 aa11.46□□□□□ -0.57
CTC1-202ENST00000449476 KRIT1O00522 736 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 PLEKHA8P1O95397 391 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 CD19P15391 556 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 PTPREP23469 700 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 BRINP3Q76B58 766 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 PAGE5Q96GU1 130 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 HINFPQ9BQA5 517 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 PHLPP2Q6ZVD8 1323 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 CRB1P82279 1406 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 FERP16591 822 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 PABPC4Q13310 644 aaKnown RBP eCLIP11.46□□□□□ -0.58
CTC1-202ENST00000449476 ABCB5Q2M3G0 1257 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 CEP128Q6ZU80 1094 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 RETREG2Q8NC44 543 aa11.46□□□□□ -0.58
CTC1-202ENST00000449476 TESPA1A2RU30 521 aaPredicted RBP11.45□□□□□ -0.58
CTC1-202ENST00000449476 TCP10L2B9ZVM9 353 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 TTLL1O95922 423 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 ALDH3A1P30838 453 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 LRRC41Q15345 812 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 INTS8Q75QN2 995 aaKnown RBP11.45□□□□□ -0.58
CTC1-202ENST00000449476 CYB5R4Q7L1T6 521 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 BSDC1Q9NW68 430 aaPredicted RBP11.45□□□□□ -0.58
CTC1-202ENST00000449476 MKRN1Q9UHC7 482 aaKnown RBP11.45□□□□□ -0.58
CTC1-202ENST00000449476 SERPINA10Q9UK55 444 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 GINS2Q9Y248 185 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 MAP3K9P80192 1104 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 FKBP3Q00688 224 aaKnown RBP11.45□□□□□ -0.58
CTC1-202ENST00000449476 RASSF7Q02833 373 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 PRKG1Q13976 671 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 EXOC3L4Q17RC7 722 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 FAM182BQ5T319 152 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 MB21D2Q8IYB1 491 aaPredicted RBP11.45□□□□□ -0.58
CTC1-202ENST00000449476 STAG1Q8WVM7 1258 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 COA7Q96BR5 231 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 RWDD2AQ9UIY3 292 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 THRAP3Q9Y2W1 955 aaKnown RBP11.45□□□□□ -0.58
CTC1-202ENST00000449476 RFX7Q2KHR2 1363 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 USP17L3A6NCW0 530 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 USP17L4A6NCW7 530 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 SOWAHDA6NJG2 315 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 SERPINB2P05120 415 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 MYL1P05976 194 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 RESP18Q5W5W9 173 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 USP17L1Q7RTZ2 530 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 FMR1NBQ8N0W7 255 aaPredicted RBP11.45□□□□□ -0.58
CTC1-202ENST00000449476 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 ACRBPQ8NEB7 543 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 GOLGA5Q8TBA6 731 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 FAM169AQ9Y6X4 670 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 ARHGEF40Q8TER5 1519 aa11.45□□□□□ -0.58
CTC1-202ENST00000449476 BBOX1O75936 387 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 GAS8O95995 478 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 NR2F2P24468 414 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 SLC16A2P36021 539 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 EHHADHQ08426 723 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 KCTD1Q719H9 257 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 OTUD6AQ7L8S5 288 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 GOLPH3LQ9H4A5 285 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 AZI2Q9H6S1 392 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 RABGAP1Q9Y3P9 1069 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 RPAP1Q9BWH6 1393 aaPredicted RBP11.44□□□□□ -0.58
CTC1-202ENST00000449476 K7ENM7 598 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 CCNE1P24864 410 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 CTNNA1P35221 906 aaKnown RBP11.44□□□□□ -0.58
CTC1-202ENST00000449476 MAN2A1Q16706 1144 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 TSGA10IPQ3SY00 556 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 CEP85LQ5SZL2 805 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 DGKHQ86XP1 1220 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 HOOK2Q96ED9 719 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 CCDC97Q96F63 343 aaPredicted RBP11.44□□□□□ -0.58
CTC1-202ENST00000449476 BRIP1Q9BX63 1249 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 STK17AQ9UEE5 414 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 NEDD4P46934 1319 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 TAOK1Q7L7X3 1001 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 NRKQ7Z2Y5 1582 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms