RNA–Protein interactions for RNA: ENST00000448511.5

CHEK2-219, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-219ENST00000448511 COA7Q96BR5 231 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 DDX11Q96FC9 970 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 BEGAINQ9BUH8 593 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 RNF26Q9BY78 433 aaPredicted RBP12.06□□□□□ -0.48
CHEK2-219ENST00000448511 EFCC1Q9HA90 598 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 HOMER2Q9NSB8 354 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 SEC63Q9UGP8 760 aaKnown RBP12.06□□□□□ -0.48
CHEK2-219ENST00000448511 CCPG1Q9ULG6 757 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 CDKL5O76039 1030 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 ALAS1P13196 640 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 ERCC3P19447 782 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 CTGFP29279 349 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 CAP1Q01518 475 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 CUL4AQ13619 759 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 RIOX2Q8IUF8 465 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 SHISA4Q96DD7 197 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 AIFM3Q96NN9 605 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 AMNQ9BXJ7 453 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 PCDHA1Q9Y5I3 950 aa12.06□□□□□ -0.48
CHEK2-219ENST00000448511 PARP14Q460N5 1801 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 GPR25O00155 361 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 SCG2P13521 617 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 AKAP17AQ02040 695 aaKnown RBP12.05□□□□□ -0.48
CHEK2-219ENST00000448511 PFKFB3Q16875 520 aaPredicted RBP12.05□□□□□ -0.48
CHEK2-219ENST00000448511 MUM1L1Q5H9M0 696 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 WWC2Q6AWC2 1192 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 TYW1BQ6NUM6 668 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 HEATR3Q7Z4Q2 680 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 NCAPG2Q86XI2 1143 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 TRIM22Q8IYM9 498 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 SMARCC2Q8TAQ2 1214 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 TRERF1Q96PN7 1200 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 LLPHQ9BRT6 129 aaKnown RBP12.05□□□□□ -0.48
CHEK2-219ENST00000448511 ARHGAP39Q9C0H5 1083 aa12.05□□□□□ -0.48
CHEK2-219ENST00000448511 ORC3Q9UBD5 711 aaPredicted RBP12.05□□□□□ -0.48
CHEK2-219ENST00000448511 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
CHEK2-219ENST00000448511 OPLAHO14841 1288 aa12.04□□□□□ -0.48
CHEK2-219ENST00000448511 SP3Q02447 781 aa12.04□□□□□ -0.48
CHEK2-219ENST00000448511 ZNF296Q8WUU4 475 aaPredicted RBP12.04□□□□□ -0.48
CHEK2-219ENST00000448511 CLEC4DQ8WXI8 215 aa12.04□□□□□ -0.48
CHEK2-219ENST00000448511 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
CHEK2-219ENST00000448511 GJB4Q9NTQ9 266 aa12.04□□□□□ -0.48
CHEK2-219ENST00000448511 RNF146Q9NTX7 359 aa12.04□□□□□ -0.48
CHEK2-219ENST00000448511 STK36Q9NRP7 1315 aa12.04□□□□□ -0.48
CHEK2-219ENST00000448511 A0A0G2JMZ2 1700 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 STXBP3O00186 592 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 NFIBO00712 420 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 FOXN1O15353 648 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 DEXIO95424 95 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 SLC25A27O95847 323 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 CCNA1P78396 465 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 LACTBP83111 547 aaPredicted RBP12.03□□□□□ -0.48
CHEK2-219ENST00000448511 WDR78Q5VTH9 848 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 BARHL2Q9NY43 387 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 VPS54Q9P1Q0 977 aa12.03□□□□□ -0.48
CHEK2-219ENST00000448511 FKTNO75072 461 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 HSPA1AP0DMV8 641 aaKnown RBP12.02□□□□□ -0.48
CHEK2-219ENST00000448511 HSPA1BP0DMV9 641 aaKnown RBP12.02□□□□□ -0.48
CHEK2-219ENST00000448511 FOSBP53539 338 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 TKFCQ3LXA3 575 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 GPR142Q7Z601 462 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 CCAR1Q8IX12 1150 aaKnown RBP12.02□□□□□ -0.48
CHEK2-219ENST00000448511 SHCBP1Q8NEM2 672 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 CHST13Q8NET6 341 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 CD99L2Q8TCZ2 262 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 TRIM47Q96LD4 638 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 ALG1Q9BT22 464 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 MROH8Q9H579 483 aa12.02□□□□□ -0.48
CHEK2-219ENST00000448511 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.48
CHEK2-219ENST00000448511 MRPL11Q9Y3B7 192 aaKnown RBP12.02□□□□□ -0.48
CHEK2-219ENST00000448511 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.02□□□□□ -0.48
CHEK2-219ENST00000448511 ABCB11O95342 1321 aa12.02□□□□□ -0.49
CHEK2-219ENST00000448511 SMCHD1A6NHR9 2005 aa12.02□□□□□ -0.49
CHEK2-219ENST00000448511 ADAMTS3O15072 1205 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 GJB2P29033 226 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 MAPK4P31152 587 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 PSMC4P43686 418 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 NAPAP54920 295 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 NOM1Q5C9Z4 860 aaKnown RBP12.01□□□□□ -0.49
CHEK2-219ENST00000448511 INTS4Q96HW7 963 aaKnown RBP12.01□□□□□ -0.49
CHEK2-219ENST00000448511 ACAD9Q9H845 621 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 A1CFQ9NQ94 594 aaKnown RBP12.01□□□□□ -0.49
CHEK2-219ENST00000448511 PNMA2Q9UL42 364 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 SMC3Q9UQE7 1217 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 COL11A1P12107 1806 aaPredicted RBP12.01□□□□□ -0.49
CHEK2-219ENST00000448511 PGK2P07205 417 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 HSPA8P11142 646 aaKnown RBP12.01□□□□□ -0.49
CHEK2-219ENST00000448511 HOXA13P31271 388 aaPredicted RBP12.01□□□□□ -0.49
CHEK2-219ENST00000448511 COPB2P35606 906 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 HMGN5P82970 282 aaKnown RBP12.01□□□□□ -0.49
CHEK2-219ENST00000448511 NSMFQ6X4W1 530 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 PLEKHH3Q7Z736 793 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 PURBQ96QR8 312 aaKnown RBP12.01□□□□□ -0.49
CHEK2-219ENST00000448511 FBXO40Q9UH90 709 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 KCNJ14Q9UNX9 436 aa12.01□□□□□ -0.49
CHEK2-219ENST00000448511 SMCO2A6NFE2 343 aa12□□□□□ -0.49
CHEK2-219ENST00000448511 hCG_1984214I3L0E3 225 aa12□□□□□ -0.49
CHEK2-219ENST00000448511 TNPO2O14787 897 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms