RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 CD99L2Q8TCZ2 262 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 PIBF1Q8WXW3 757 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 PHKBQ93100 1093 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 RNF146Q9NTX7 359 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 FBXO40Q9UH90 709 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 V9GY48 417 aaPredicted RBP16.23■□□□□ 0.19
CTSS-202ENST00000448301 STK36Q9NRP7 1315 aa16.23■□□□□ 0.19
CTSS-202ENST00000448301 hCG_1984214I3L0E3 225 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
CTSS-202ENST00000448301 CTDNEP1O95476 244 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 PSMC4P43686 418 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 SLC4A3P48751 1232 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 AKAP17AQ02040 695 aaKnown RBP16.22■□□□□ 0.19
CTSS-202ENST00000448301 SSRP1Q08945 709 aaKnown RBP16.22■□□□□ 0.19
CTSS-202ENST00000448301 USH1GQ495M9 461 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 PLEKHH3Q7Z736 793 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 CCDC83Q8IWF9 413 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 ZNF713Q8N859 430 aaPredicted RBP16.22■□□□□ 0.19
CTSS-202ENST00000448301 TRERF1Q96PN7 1200 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 SLC26A6Q9BXS9 759 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 ARHGAP39Q9C0H5 1083 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 ACAD9Q9H845 621 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 LCTP09848 1927 aa16.22■□□□□ 0.19
CTSS-202ENST00000448301 hCG_1642624A0A1W2PR95 340 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 DEXIO95424 95 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 GNRH1P01148 92 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 TAL1P17542 331 aaPredicted RBP16.21■□□□□ 0.19
CTSS-202ENST00000448301 LBX1P52954 281 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 CAP1Q01518 475 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 ARHGEF6Q15052 776 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 PFKFB3Q16875 520 aaPredicted RBP16.21■□□□□ 0.19
CTSS-202ENST00000448301 WDR78Q5VTH9 848 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 NSUN7Q8NE18 718 aaKnown RBP16.21■□□□□ 0.19
CTSS-202ENST00000448301 TRIM47Q96LD4 638 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 LLPHQ9BRT6 129 aaKnown RBP16.21■□□□□ 0.19
CTSS-202ENST00000448301 CWC22Q9HCG8 908 aaKnown RBP16.21■□□□□ 0.19
CTSS-202ENST00000448301 HOMER2Q9NSB8 354 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 MRPL11Q9Y3B7 192 aaKnown RBP16.21■□□□□ 0.19
CTSS-202ENST00000448301 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
CTSS-202ENST00000448301 STRNO43815 780 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 SCG2P13521 617 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 PTPREP23469 700 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 PKN1Q16512 942 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 MUM1L1Q5H9M0 696 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 ABRAQ8N0Z2 381 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 CLEC4DQ8WXI8 215 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 COA7Q96BR5 231 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 MAF1Q9H063 256 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 IVNS1ABPQ9Y6Y0 642 aa16.2■□□□□ 0.18
CTSS-202ENST00000448301 PTPDC1A2A3K4 754 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 K7ELQ4 463 aaPredicted RBP16.19■□□□□ 0.18
CTSS-202ENST00000448301 ECM2O94769 699 aaPredicted RBP16.19■□□□□ 0.18
CTSS-202ENST00000448301 FCER1AP12319 257 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 GRB14Q14449 540 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 WWC2Q6AWC2 1192 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 PPP1R18Q6NYC8 613 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 HEATR3Q7Z4Q2 680 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 SOCS4Q8WXH5 440 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 BARHL2Q9NY43 387 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 PFASO15067 1338 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 SLC15A5A6NIM6 579 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 NFIBO00712 420 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 PPFIA3O75145 1194 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 KCTD2Q14681 263 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 MORN1Q5T089 497 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 HSCBQ8IWL3 235 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 RGS22Q8NE09 1264 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 GPKOWQ92917 476 aaPredicted RBP eCLIP16.19■□□□□ 0.18
CTSS-202ENST00000448301 MMP19Q99542 508 aa16.19■□□□□ 0.18
CTSS-202ENST00000448301 STXBP3O00186 592 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 OPLAHO14841 1288 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 JAK2O60674 1132 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 HOXD10P28358 340 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 PRMT2P55345 433 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 HMGN5P82970 282 aaKnown RBP16.18■□□□□ 0.18
CTSS-202ENST00000448301 GHRHRQ02643 423 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 CUL4AQ13619 759 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 MCF2L2Q86YR7 1114 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 ANKRD35Q8N283 1001 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 SAMD3Q8N6K7 520 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 A1CFQ9NQ94 594 aaKnown RBP16.18■□□□□ 0.18
CTSS-202ENST00000448301 PRDM10Q9NQV6 1147 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
CTSS-202ENST00000448301 GJD2Q9UKL4 321 aa16.18■□□□□ 0.18
CTSS-202ENST00000448301 FDPSP14324 419 aaKnown RBP16.17■□□□□ 0.18
CTSS-202ENST00000448301 ADORA2AP29274 412 aa16.17■□□□□ 0.18
CTSS-202ENST00000448301 NAPAP54920 295 aa16.17■□□□□ 0.18
CTSS-202ENST00000448301 TYW1BQ6NUM6 668 aa16.17■□□□□ 0.18
CTSS-202ENST00000448301 OTOP1Q7RTM1 612 aa16.17■□□□□ 0.18
CTSS-202ENST00000448301 FAM177A1Q8N128 213 aaPredicted RBP16.17■□□□□ 0.18
CTSS-202ENST00000448301 CCDC12Q8WUD4 166 aaPredicted RBP16.17■□□□□ 0.18
CTSS-202ENST00000448301 WASF1Q92558 559 aa16.17■□□□□ 0.18
CTSS-202ENST00000448301 USP6NLQ92738 828 aa16.17■□□□□ 0.18
CTSS-202ENST00000448301 SH3GLB2Q9NR46 395 aa16.17■□□□□ 0.18
CTSS-202ENST00000448301 MAP3K20Q9NYL2 800 aaKnown RBP16.17■□□□□ 0.18
CTSS-202ENST00000448301 CYP39A1Q9NYL5 469 aa16.17■□□□□ 0.18
CTSS-202ENST00000448301 SRRDQ9UH36 339 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms