RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MARCKSP29966 332 aaPredicted RBP9.71□□□□□ -0.86
NIPBL-202ENST00000448238 BMP2KLQ5H9B9 411 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 ANGPTL8Q6UXH0 198 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 MICALL2Q8IY33 904 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 PPHLN1Q8NEY8 458 aaKnown RBP9.71□□□□□ -0.86
NIPBL-202ENST00000448238 USP26Q9BXU7 913 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 STAT1P42224 750 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 ATXN3P54252 364 aaPredicted RBP9.71□□□□□ -0.86
NIPBL-202ENST00000448238 ITKQ08881 620 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 KLHL30Q0D2K2 578 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 SULT6B1Q6IMI4 303 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 PPP1R2P3Q6NXS1 205 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 KRT74Q7RTS7 529 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 WAPLQ7Z5K2 1190 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 ZNF653Q96CK0 615 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 THAP11Q96EK4 314 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 NUDCD1Q96RS6 583 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 FOXP3Q9BZS1 431 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 ANKRD2Q9GZV1 360 aa9.71□□□□□ -0.86
NIPBL-202ENST00000448238 RGS5O15539 181 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 STAM2O75886 525 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 MAGEA1P43355 309 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 RARS2Q5T160 578 aaKnown RBP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 NOP9Q86U38 636 aaKnown RBP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 KDM4CQ9H3R0 1056 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 SLC8A2Q9UPR5 921 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 GOLGA8JA6NMD2 632 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 TCP1P17987 556 aaKnown RBP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 OLFML3Q9NRN5 406 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 STON1Q9Y6Q2 735 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 KRT33BQ14525 404 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 SNX19Q92543 992 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 ZSCAN9O15535 394 aaPredicted RBP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 KRT14P02533 472 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 CCDC149Q6ZUS6 474 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 ZFYVE19Q96K21 471 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 RPRD1BQ9NQG5 326 aaKnown RBP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 HDAC1Q13547 482 aaPredicted RBP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 CSGALNACT2Q8N6G5 542 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 TEKT4Q8WW24 435 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 NCLNQ969V3 563 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 GGNBP2Q9H3C7 697 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 C16orf96A6NNT2 1141 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 NOP56O00567 594 aaKnown RBP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 SAT1P21673 171 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 PLD3Q8IV08 490 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 MLKLQ8NB16 471 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 B4GALNT2Q8NHY0 566 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 N4BP1O75113 896 aaKnown RBP9.7□□□□□ -0.86
NIPBL-202ENST00000448238 SLC12A1Q13621 1099 aa9.7□□□□□ -0.86
NIPBL-202ENST00000448238 GUCA1CO95843 209 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 UBN1Q9NPG3 1134 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 GID8Q9NWU2 228 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 SUGT1Q9Y2Z0 365 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 ATP8B1O43520 1251 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 TADA3O75528 432 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 VCAM1P19320 739 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 SNAP25P60880 206 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 MDM2Q00987 491 aaPredicted RBP9.69□□□□□ -0.86
NIPBL-202ENST00000448238 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 BRD1O95696 1058 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 CAPN1P07384 714 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 ATF7P17544 494 aaPredicted RBP9.69□□□□□ -0.86
NIPBL-202ENST00000448238 ATP1A2P50993 1020 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 DDI1Q8WTU0 396 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 SRGAP2CP0DJJ0 459 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 PMS2P54278 862 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 E4F1Q66K89 784 aaPredicted RBP9.69□□□□□ -0.86
NIPBL-202ENST00000448238 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 CRLF3Q8IUI8 442 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 MBIPQ9NS73 344 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 RRP15Q9Y3B9 282 aaKnown RBP9.69□□□□□ -0.86
NIPBL-202ENST00000448238 MYO1EQ12965 1108 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 FGD2Q7Z6J4 655 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 ASCC2Q9H1I8 757 aaPredicted RBP9.69□□□□□ -0.86
NIPBL-202ENST00000448238 C6orf203Q9P0P8 240 aaPredicted RBP9.69□□□□□ -0.86
NIPBL-202ENST00000448238 A6NJR5 290 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 CHUKO15111 745 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 CD19P15391 556 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 BRF1Q92994 677 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 PKD2L2Q9NZM6 624 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 RNF103-CHMP3A0A140T963 221 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 PTPREP23469 700 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 MAP4P27816 1152 aaKnown RBP9.69□□□□□ -0.86
NIPBL-202ENST00000448238 E2F5Q15329 346 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 TSC22D1Q15714 1073 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 CCDC142Q17RM4 750 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 C11orf88Q6PI97 169 aa9.69□□□□□ -0.86
NIPBL-202ENST00000448238 SLC44A4Q53GD3 710 aa9.68□□□□□ -0.86
NIPBL-202ENST00000448238 NDUFAF2Q8N183 169 aa9.68□□□□□ -0.86
NIPBL-202ENST00000448238 TEX13AQ9BXU3 409 aaPredicted RBP9.68□□□□□ -0.86
NIPBL-202ENST00000448238 MRGBPQ9NV56 204 aa9.68□□□□□ -0.86
NIPBL-202ENST00000448238 ARHGEF35A5YM69 484 aa9.68□□□□□ -0.86
NIPBL-202ENST00000448238 PAK1Q13153 545 aa9.68□□□□□ -0.86
NIPBL-202ENST00000448238 VPS37AQ8NEZ2 397 aa9.68□□□□□ -0.86
NIPBL-202ENST00000448238 CDC40O60508 579 aaKnown RBP eCLIP9.68□□□□□ -0.86
NIPBL-202ENST00000448238 PMLP29590 882 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms