RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 DUSP10Q9Y6W6 482 aa14.44□□□□□ -0.1
SHC1-210ENST00000448116 KLRF2D3W0D1 207 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 KLRC4O43908 158 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 EEF1GP26641 437 aaKnown RBP14.43□□□□□ -0.1
SHC1-210ENST00000448116 GNAQP50148 359 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 DNM2P50570 870 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 STK4Q13043 487 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 SLC35G1Q2M3R5 365 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 SBK1Q52WX2 424 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 WDR59Q6PJI9 974 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 DGKHQ86XP1 1220 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 NOC4LQ9BVI4 516 aaKnown RBP14.43□□□□□ -0.1
SHC1-210ENST00000448116 LACRTQ9GZZ8 138 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 MAD2L2Q9UI95 211 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 BCL9LQ86UU0 1499 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 BCORQ6W2J9 1755 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 CYLC1P35663 651 aaPredicted RBP14.43□□□□□ -0.1
SHC1-210ENST00000448116 ANKRD40Q6AI12 368 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 LRRC15Q8TF66 581 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 CNOT6LQ96LI5 555 aaKnown RBP14.43□□□□□ -0.1
SHC1-210ENST00000448116 ANKRD2Q9GZV1 360 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 CAPN11Q9UMQ6 739 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 KRT86O43790 486 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 KRT83P78385 493 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 SMARCC1Q92922 1105 aaPredicted RBP14.43□□□□□ -0.1
SHC1-210ENST00000448116 EXOC4Q96A65 974 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 TMEM47Q9BQJ4 181 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 THAP9Q9H5L6 903 aa14.43□□□□□ -0.1
SHC1-210ENST00000448116 XIRP1Q702N8 1843 aaKnown RBP14.43□□□□□ -0.1
SHC1-210ENST00000448116 ZNF185O15231 689 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 IRX5P78411 483 aaPredicted RBP14.42□□□□□ -0.1
SHC1-210ENST00000448116 AMPD2Q01433 879 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 GRM4Q14833 912 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 GRIK5Q16478 980 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 SPTY2D1Q68D10 685 aaPredicted RBP14.42□□□□□ -0.1
SHC1-210ENST00000448116 TTI2Q6NXR4 508 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 USP17L2Q6R6M4 530 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 GIMAP8Q8ND71 665 aaPredicted RBP14.42□□□□□ -0.1
SHC1-210ENST00000448116 PLCD4Q9BRC7 762 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 SLC39A2Q9NP94 309 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 SMCO2A6NFE2 343 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 TXKP42681 527 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 ZNF507Q8TCN5 953 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 P2RX5Q93086 422 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 DUSP9Q99956 384 aaKnown RBP14.42□□□□□ -0.1
SHC1-210ENST00000448116 NHEJ1Q9H9Q4 299 aaPredicted RBP14.42□□□□□ -0.1
SHC1-210ENST00000448116 ARAP2Q8WZ64 1704 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 RCCD1A6NED2 376 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 LRRIQ3A6PVS8 624 aaPredicted RBP14.42□□□□□ -0.1
SHC1-210ENST00000448116 STXBP3O00186 592 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 ZPR1O75312 459 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 RHOBTB3O94955 611 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 SOGA3Q5TF21 947 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 LEKR1Q6ZMV7 388 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 DYMQ7RTS9 669 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 KRT26Q7Z3Y9 468 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 GSPT2Q8IYD1 628 aaKnown RBP14.42□□□□□ -0.1
SHC1-210ENST00000448116 CDCA7Q9BWT1 371 aaPredicted RBP14.42□□□□□ -0.1
SHC1-210ENST00000448116 UBA5Q9GZZ9 404 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 SH3GLB2Q9NR46 395 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 KBTBD4Q9NVX7 518 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 BIN2Q9UBW5 565 aaPredicted RBP14.42□□□□□ -0.1
SHC1-210ENST00000448116 SPATA31A1Q5TZJ5 1347 aa14.42□□□□□ -0.1
SHC1-210ENST00000448116 MYH13Q9UKX3 1938 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 NKRFO15226 690 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHC1-210ENST00000448116 OR52Z1P0C646 297 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 IDEP14735 1019 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 TUBB4BP68371 445 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 KCNB1Q14721 858 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 CCDC96Q2M329 555 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 DNAJC7Q99615 494 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 BARHL2Q9NY43 387 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 A0A1W2PQC6 194 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 MRPS25P82663 173 aaKnown RBP14.41□□□□□ -0.1
SHC1-210ENST00000448116 RAD51AP2Q09MP3 1159 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 PDS5AQ29RF7 1337 aaKnown RBP14.41□□□□□ -0.1
SHC1-210ENST00000448116 TRAPPC11Q7Z392 1133 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 SMCR8Q8TEV9 937 aaPredicted RBP14.41□□□□□ -0.1
SHC1-210ENST00000448116 CCDC42Q96M95 316 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 PSMB7Q99436 277 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 CCSER1Q9C0I3 900 aa14.41□□□□□ -0.1
SHC1-210ENST00000448116 FAM207AQ9NSI2 230 aaPredicted RBP14.41□□□□□ -0.1
SHC1-210ENST00000448116 BAG3O95817 575 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 SRGNP10124 158 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 CCNE1P24864 410 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 MATR3P43243 847 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHC1-210ENST00000448116 NONOQ15233 471 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHC1-210ENST00000448116 FKBP15Q5T1M5 1219 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 DHTKD1Q96HY7 919 aaPredicted RBP14.4□□□□□ -0.1
SHC1-210ENST00000448116 TRIM9Q9C026 710 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 MMRN2Q9H8L6 949 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 CACNA1SQ13698 1873 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 PLEKP08567 350 aaPredicted RBP14.4□□□□□ -0.1
SHC1-210ENST00000448116 KIF5AQ12840 1032 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 SPA17Q15506 151 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 TPTE2Q6XPS3 522 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 PTF1AQ7RTS3 328 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 UIMC1Q96RL1 719 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 ACBD3Q9H3P7 528 aa14.4□□□□□ -0.1
SHC1-210ENST00000448116 DEF6Q9H4E7 631 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms