RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 GIT1Q9Y2X7 761 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 FRMPD2Q68DX3 1309 aaPredicted RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 SCO2A0A1W2PP80 73 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 ZNF891A8MT65 544 aaPredicted RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 FAM229AH3BQW9 127 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 ERC2O15083 957 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 FKBP9O95302 570 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 CRTAMO95727 393 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 MYL3P08590 195 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 SPATA31C1P0DKV0 1188 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 MAOBP27338 520 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 ADCYAP1R1P41586 468 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 RECQLP46063 649 aaPredicted RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 KCNJ6P48051 423 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 TRAPPC10P48553 1259 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 PCBP4P57723 403 aaKnown RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 FAPQ12884 760 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 GTF2H3Q13889 308 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 GRM3Q14832 879 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 KIF4BQ2VIQ3 1234 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 RGL3Q3MIN7 710 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 ATP13A4Q4VNC1 1196 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 TMEM240Q5SV17 173 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 FKBP9P1Q75LS8 142 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 HDGFL2Q7Z4V5 671 aaPredicted RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 PCGF5Q86SE9 256 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 DDX53Q86TM3 631 aaKnown RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 PNMA8AQ86V59 439 aaPredicted RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 KIF18BQ86Y91 864 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 SMAP1Q8IYB5 467 aaPredicted RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 NXPE1Q8N323 547 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 CBARPQ8N350 705 aaPredicted RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 TMTC2Q8N394 836 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 CPA6Q8N4T0 437 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 ANKRD42Q8N9B4 389 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 VPS37AQ8NEZ2 397 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 ADCY4Q8NFM4 1077 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 MRGPRX3Q96LB0 322 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 CCDC74BQ96LY2 380 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 LRGUKQ96M69 825 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 ORAI3Q9BRQ5 295 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 MKRN2Q9H000 416 aaKnown RBP4.8□□□□□ -1.64
PMS1-216ENST00000447734 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.8□□□□□ -1.64
PMS1-216ENST00000447734 ZFP64Q9NPA5 681 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 WHRNQ9P202 907 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 TJP2Q9UDY2 1190 aa4.8□□□□□ -1.64
PMS1-216ENST00000447734 WASHC2AQ641Q2 1341 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 K7ESF4 209 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 AQP7O14520 342 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 APAF1O14727 1248 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 GAS7O60861 476 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 ULK1O75385 1050 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 KCNH1O95259 989 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 ITGA4P13612 1032 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 ADH6P28332 368 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 PPM1FP49593 454 aaPredicted RBP4.79□□□□□ -1.64
PMS1-216ENST00000447734 PIP4K2BP78356 416 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 MAP4K2Q12851 820 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 KLF1Q13351 362 aaPredicted RBP4.79□□□□□ -1.64
PMS1-216ENST00000447734 NTRK3Q16288 839 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 SLC6A19Q695T7 634 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 FAM117BQ6P1L5 589 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 EPM2AIP1Q7L775 607 aaPredicted RBP4.79□□□□□ -1.64
PMS1-216ENST00000447734 C11orf74Q86VG3 221 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 AMOTL1Q8IY63 956 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 CPXCR1Q8N123 301 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 CACTIN-AS1Q8N1I8 211 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 SMC1BQ8NDV3 1235 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 WDR89Q96FK6 387 aaPredicted RBP4.79□□□□□ -1.64
PMS1-216ENST00000447734 AHCYL2Q96HN2 611 aaKnown RBP4.79□□□□□ -1.64
PMS1-216ENST00000447734 GPR101Q96P66 508 aaPredicted RBP4.79□□□□□ -1.64
PMS1-216ENST00000447734 LPIN3Q9BQK8 851 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 NRSN2Q9GZP1 204 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 MAN1C1Q9NR34 630 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 MAP3K20Q9NYL2 800 aaKnown RBP4.79□□□□□ -1.64
PMS1-216ENST00000447734 SAMD15Q9P1V8 674 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 NAGPAQ9UK23 515 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 ZKSCAN5Q9Y2L8 839 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 HIF3AQ9Y2N7 669 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 EMC9Q9Y3B6 208 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 ZNF451Q9Y4E5 1061 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 TRAF6Q9Y4K3 522 aa4.79□□□□□ -1.64
PMS1-216ENST00000447734 CBX4O00257 560 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 SIN3BO75182 1162 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 GLRX3O76003 335 aaKnown RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 LTFP02788 710 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 CTSBP07858 339 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 HSP90AA1P07900 732 aaKnown RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 SNRPB2P08579 225 aaKnown RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 SLFN14P0C7P3 912 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 NAT1P18440 290 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 CD247P20963 164 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 LPOP22079 712 aaPredicted RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 SERPINB3P29508 390 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 LSSP48449 732 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 GFRA1P56159 465 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 ERVK-21P61565 698 aa4.78□□□□□ -1.64
PMS1-216ENST00000447734 PCBP2Q15366 365 aaKnown RBP eCLIP4.78□□□□□ -1.64
PMS1-216ENST00000447734 MAPRE1Q15691 268 aaKnown RBP4.78□□□□□ -1.64
PMS1-216ENST00000447734 ZC3H12AQ5D1E8 599 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms