RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 TSPY8P0CW00 308 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 VSNL1P62760 191 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 SCRN1Q12765 414 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 SLMAPQ14BN4 828 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 ZYXQ15942 572 aaKnown RBP6.09□□□□□ -1.43
LMO3-209ENST00000447609 CEP85LQ5SZL2 805 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 CCDC129Q6ZRS4 1044 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 MFSD6Q6ZSS7 791 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 YTHDF3Q7Z739 585 aaKnown RBP6.09□□□□□ -1.43
LMO3-209ENST00000447609 IFNLR1Q8IU57 520 aaPredicted RBP6.09□□□□□ -1.43
LMO3-209ENST00000447609 ENOX1Q8TC92 643 aaKnown RBP6.09□□□□□ -1.43
LMO3-209ENST00000447609 NUP133Q8WUM0 1156 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 DPF2Q92785 391 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 FAM227BQ96M60 508 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 TCEANC2Q96MN5 208 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 GPRC5DQ9NZD1 345 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 SUGT1Q9Y2Z0 365 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 ZNF541Q9H0D2 1346 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 SHANK3Q9BYB0 1731 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 CLSTN1O94985 981 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 FOSBP53539 338 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 GNGT1P63211 74 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 SPAG1Q07617 926 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 RASA3Q14644 834 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 MYSM1Q5VVJ2 828 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 ALS2CLQ60I27 953 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 ARFGAP2Q8N6H7 521 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 RSRC1Q96IZ7 334 aaKnown RBP6.09□□□□□ -1.43
LMO3-209ENST00000447609 JPH2Q9BR39 696 aaPredicted RBP6.09□□□□□ -1.43
LMO3-209ENST00000447609 TRIM6Q9C030 488 aaPredicted RBP6.09□□□□□ -1.43
LMO3-209ENST00000447609 GGA2Q9UJY4 613 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 ADGRG1Q9Y653 693 aa6.09□□□□□ -1.43
LMO3-209ENST00000447609 USP17L12C9JPN9 530 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 USP17L21D6R901 530 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 ATP1A3P13637 1013 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 ERCC5P28715 1186 aaPredicted RBP6.09□□□□□ -1.44
LMO3-209ENST00000447609 IRAK1P51617 712 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 USP14P54578 494 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 PPP2R5AQ15172 486 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 CYP26C1Q6V0L0 522 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 TOGARAM2Q6ZUX3 1019 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 SLC51AQ86UW1 340 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 TC2NQ8N9U0 490 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 SMC1BQ8NDV3 1235 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 PNKPQ96T60 521 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 BATF3Q9NR55 127 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 FANCLQ9NW38 375 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 HPCAL4Q9UM19 191 aa6.09□□□□□ -1.44
LMO3-209ENST00000447609 SRRM3A6NNA2 597 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 MEFVO15553 781 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 FGFR2P21802 821 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 HUNKP57058 714 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 SNCBQ16143 134 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 NBPF9Q3BBW0 867 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 PREPLQ4J6C6 727 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 DACT2Q5SW24 774 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 CHADLQ6NUI6 762 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 FOXR1Q6PIV2 292 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 USP50Q70EL3 339 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 RASGRP2Q7LDG7 609 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 TMEM139Q8IV31 216 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 P3H4Q92791 437 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 N4BP2L2Q92802 583 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 GLIS2Q9BZE0 524 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 HELLSQ9NRZ9 838 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 TMOD4Q9NZQ9 345 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 ZNF70Q9UC06 446 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 DAGLAQ9Y4D2 1042 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 TJP1Q07157 1748 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 A0A0D9SFI3 127 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 N4BP1O75113 896 aaKnown RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 PPFIA3O75145 1194 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 PRDM1O75626 825 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 VIL1P09327 827 aaKnown RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 IL1R1P14778 569 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 ARID4AP29374 1257 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 SMTNP53814 917 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 CLNS1AP54105 237 aaKnown RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 MAP2K1Q02750 393 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 SLC39A14Q15043 492 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 UBE3CQ15386 1083 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 CCDC121Q6ZUS5 278 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 PRMT6Q96LA8 375 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 SEC62Q99442 399 aaKnown RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 DEFB129Q9H1M3 183 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 TAF1DQ9H5J8 278 aaPredicted RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 SPATS2LQ9NUQ6 558 aaKnown RBP6.08□□□□□ -1.44
LMO3-209ENST00000447609 SERPINA10Q9UK55 444 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 FAM184BQ9ULE4 1060 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 NFE2L3Q9Y4A8 694 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 MROH7-TTC4A0A0A0MT08 1334 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 LTBP3Q9NS15 1303 aa6.08□□□□□ -1.44
LMO3-209ENST00000447609 GOLGA6L10A6NI86 522 aa6.07□□□□□ -1.44
LMO3-209ENST00000447609 ZEB2O60315 1214 aa6.07□□□□□ -1.44
LMO3-209ENST00000447609 NEBLO76041 1014 aa6.07□□□□□ -1.44
LMO3-209ENST00000447609 GBP2P32456 591 aaPredicted RBP6.07□□□□□ -1.44
LMO3-209ENST00000447609 ADD2P35612 726 aa6.07□□□□□ -1.44
LMO3-209ENST00000447609 KRT83P78385 493 aa6.07□□□□□ -1.44
LMO3-209ENST00000447609 SAFBQ15424 915 aaKnown RBP eCLIP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms