RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 PPATQ06203 517 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 USH1GQ495M9 461 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 IGDCC4Q8TDY8 1250 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 CNKSR2Q8WXI2 1034 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 FAM212AQ96EL1 285 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 MTA3Q9BTC8 594 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 CPVLQ9H3G5 476 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 RPAP3Q9H6T3 665 aaPredicted RBP6.73□□□□□ -1.33
PROM1-201ENST00000447510 HOMER2Q9NSB8 354 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 DACT1Q9NYF0 836 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 PNMA3Q9UL41 463 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 ARAP2Q8WZ64 1704 aa6.73□□□□□ -1.33
PROM1-201ENST00000447510 A0A087WWV3 80 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 SYT1P21579 422 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 ZNF75DP51815 510 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 GTF2A2P52657 109 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 RCSD1Q6JBY9 416 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.72□□□□□ -1.33
PROM1-201ENST00000447510 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.72□□□□□ -1.33
PROM1-201ENST00000447510 CCDC12Q8WUD4 166 aaPredicted RBP6.72□□□□□ -1.33
PROM1-201ENST00000447510 DCAF4Q8WV16 495 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 ALG1Q9BT22 464 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 SENP2Q9HC62 589 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 TCP11L1Q9NUJ3 509 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 WDR19Q8NEZ3 1342 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 PTPDC1A2A3K4 754 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 KIF3CO14782 793 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 IRF6O14896 467 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 PHACTR2O75167 634 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 GJB2P29033 226 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 FSTL1Q12841 308 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 CCDC144BQ3MJ40 725 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 PLEKHA4Q9H4M7 779 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 IL17RBQ9NRM6 502 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 DNAI1Q9UI46 699 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 USP17L15C9J2P7 530 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 USP17L13C9JLJ4 530 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 USP17L11C9JVI0 530 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 USP17L18D6R9N7 530 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 USP17L22D6RA61 530 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 USP17L17D6RBQ6 530 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 USP17L19D6RCP7 530 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 USP17L20D6RJB6 530 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 SMC2O95347 1197 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 SNAP25P60880 206 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 USP17L24Q0WX57 530 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 TOB2Q14106 344 aaPredicted RBP6.72□□□□□ -1.33
PROM1-201ENST00000447510 MCM6Q14566 821 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 SYCP1Q15431 976 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 SYDE2Q5VT97 1194 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 FAM160B2Q86V87 743 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 LPAR1Q92633 364 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 KCNB2Q92953 911 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 PGAP2Q9UHJ9 254 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 TMX2Q9Y320 296 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 IVNS1ABPQ9Y6Y0 642 aa6.72□□□□□ -1.33
PROM1-201ENST00000447510 CXCL11O14625 94 aa6.71□□□□□ -1.33
PROM1-201ENST00000447510 WDR46O15213 610 aaKnown RBP6.71□□□□□ -1.33
PROM1-201ENST00000447510 PFKFB2O60825 505 aa6.71□□□□□ -1.33
PROM1-201ENST00000447510 F13A1P00488 732 aa6.71□□□□□ -1.33
PROM1-201ENST00000447510 ALAS1P13196 640 aa6.71□□□□□ -1.33
PROM1-201ENST00000447510 MNAT1P51948 309 aa6.71□□□□□ -1.33
PROM1-201ENST00000447510 TAF1CQ15572 869 aaPredicted RBP6.71□□□□□ -1.33
PROM1-201ENST00000447510 CYP4F22Q6NT55 531 aa6.71□□□□□ -1.33
PROM1-201ENST00000447510 SLF1Q9BQI6 1058 aa6.71□□□□□ -1.33
PROM1-201ENST00000447510 SRRTQ9BXP5 876 aaKnown RBP6.71□□□□□ -1.33
PROM1-201ENST00000447510 ZNF446Q9NWS9 450 aa6.71□□□□□ -1.33
PROM1-201ENST00000447510 HOXC10Q9NYD6 342 aa6.71□□□□□ -1.33
PROM1-201ENST00000447510 LIG1P18858 919 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 SREBF2Q12772 1141 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 PPIL2Q13356 520 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 RRP1BQ14684 758 aaKnown RBP6.71□□□□□ -1.34
PROM1-201ENST00000447510 TTBK2Q6IQ55 1244 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 NSMFQ6X4W1 530 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 SGMS1Q86VZ5 419 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 NCAPG2Q86XI2 1143 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 LRRN4CLQ8ND94 238 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 GEMIN8Q9NWZ8 242 aaKnown RBP6.71□□□□□ -1.34
PROM1-201ENST00000447510 VPS18Q9P253 973 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 KIAA1551Q9HCM1 1747 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 PLEKHA8P1O95397 391 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 DEXIO95424 95 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 SCRN1Q12765 414 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 STAG2Q8N3U4 1231 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 CCDC148Q8NFR7 591 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 SMARCC2Q8TAQ2 1214 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 WNK4Q96J92 1243 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 PIGSQ96S52 555 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 KIAA1683Q9H0B3 1180 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 FEM1BQ9UK73 627 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 CCPG1Q9ULG6 757 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 SNCAIPQ9Y6H5 919 aa6.71□□□□□ -1.34
PROM1-201ENST00000447510 ROBO3Q96MS0 1386 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 MANSC4A6NHS7 340 aaPredicted RBP6.7□□□□□ -1.34
PROM1-201ENST00000447510 SPDYE5A6NIY4 337 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 JAK2O60674 1132 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 FGRP09769 529 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 ZNF76P36508 570 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 APLP1P51693 650 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 KRT85P78386 507 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms