RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 KRT40Q6A162 431 aa14.76□□□□□ -0.05
SSR4-205ENST00000447375 ZNF589Q86UQ0 364 aaPredicted RBP14.76□□□□□ -0.05
SSR4-205ENST00000447375 RIOX2Q8IUF8 465 aa14.76□□□□□ -0.05
SSR4-205ENST00000447375 UIMC1Q96RL1 719 aa14.76□□□□□ -0.05
SSR4-205ENST00000447375 NAPBQ9H115 298 aa14.76□□□□□ -0.05
SSR4-205ENST00000447375 HIPK3Q9H422 1215 aa14.76□□□□□ -0.05
SSR4-205ENST00000447375 SPC25Q9HBM1 224 aa14.76□□□□□ -0.05
SSR4-205ENST00000447375 DIAPH3Q9NSV4 1193 aa14.76□□□□□ -0.05
SSR4-205ENST00000447375 ZHX1Q9UKY1 873 aaPredicted RBP14.76□□□□□ -0.05
SSR4-205ENST00000447375 GBF1Q92538 1859 aa14.76□□□□□ -0.05
SSR4-205ENST00000447375 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
SSR4-205ENST00000447375 ZBBXA8MT70 800 aa14.75□□□□□ -0.05
SSR4-205ENST00000447375 SNAI1O95863 264 aaPredicted RBP14.75□□□□□ -0.05
SSR4-205ENST00000447375 HSPD1P10809 573 aaKnown RBP14.75□□□□□ -0.05
SSR4-205ENST00000447375 ATP2A2P16615 1042 aaKnown RBP14.75□□□□□ -0.05
SSR4-205ENST00000447375 MFAP1P55081 439 aaKnown RBP14.75□□□□□ -0.05
SSR4-205ENST00000447375 CCL23P55773 120 aa14.75□□□□□ -0.05
SSR4-205ENST00000447375 TMEM67Q5HYA8 995 aa14.75□□□□□ -0.05
SSR4-205ENST00000447375 CWC27Q6UX04 472 aaKnown RBP14.75□□□□□ -0.05
SSR4-205ENST00000447375 TMEM179Q6ZVK1 233 aa14.75□□□□□ -0.05
SSR4-205ENST00000447375 RPUSD2Q8IZ73 545 aaKnown RBP14.75□□□□□ -0.05
SSR4-205ENST00000447375 MSL3Q8N5Y2 521 aaKnown RBP14.75□□□□□ -0.05
SSR4-205ENST00000447375 UMODL1Q5DID0 1318 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 EPOPA6NHQ4 379 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 FGAP02671 866 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 CA3P07451 260 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 AKR1B1P15121 316 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 STAT3P40763 770 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 GNASQ5JWF2 1037 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 SPICE1Q8N0Z3 855 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 ANAPC4Q9UJX5 808 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 MYH4Q9Y623 1939 aa14.74□□□□□ -0.05
SSR4-205ENST00000447375 RASA1P20936 1047 aa14.73□□□□□ -0.05
SSR4-205ENST00000447375 GJA9P57773 515 aa14.73□□□□□ -0.05
SSR4-205ENST00000447375 PPARAQ07869 468 aa14.73□□□□□ -0.05
SSR4-205ENST00000447375 CSPP1Q1MSJ5 1256 aa14.73□□□□□ -0.05
SSR4-205ENST00000447375 SIAH1Q8IUQ4 282 aa14.73□□□□□ -0.05
SSR4-205ENST00000447375 FBXL18Q96ME1 805 aa14.73□□□□□ -0.05
SSR4-205ENST00000447375 MKNK2Q9HBH9 465 aa14.73□□□□□ -0.05
SSR4-205ENST00000447375 ZNF287Q9HBT7 754 aa14.73□□□□□ -0.05
SSR4-205ENST00000447375 ADAMTS5Q9UNA0 930 aa14.73□□□□□ -0.05
SSR4-205ENST00000447375 ZMYM6O95789 1325 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 SLC3A2P08195 630 aaKnown RBP14.72□□□□□ -0.05
SSR4-205ENST00000447375 CHMLP26374 656 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 ACVR2BQ13705 512 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 MAMDC4Q6UXC1 1216 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 SKAP1Q86WV1 359 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 GJD3Q8N144 294 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 ARNTL2Q8WYA1 636 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.72□□□□□ -0.05
SSR4-205ENST00000447375 UPF3AQ9H1J1 476 aaKnown RBP14.72□□□□□ -0.05
SSR4-205ENST00000447375 KCNH6Q9H252 994 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 KANSL2Q9H9L4 492 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 PPP4R2Q9NY27 417 aa14.72□□□□□ -0.05
SSR4-205ENST00000447375 GREB1LQ9C091 1923 aaPredicted RBP14.72□□□□□ -0.05
SSR4-205ENST00000447375 MCM3APO60318 1980 aa14.71□□□□□ -0.05
SSR4-205ENST00000447375 WDR46O15213 610 aaKnown RBP14.71□□□□□ -0.05
SSR4-205ENST00000447375 ADCY6O43306 1168 aa14.71□□□□□ -0.05
SSR4-205ENST00000447375 ALADP13716 330 aa14.71□□□□□ -0.05
SSR4-205ENST00000447375 COPB2P35606 906 aa14.71□□□□□ -0.05
SSR4-205ENST00000447375 PDE4BQ07343 736 aa14.71□□□□□ -0.05
SSR4-205ENST00000447375 ZNF444Q8N0Y2 327 aaPredicted RBP14.71□□□□□ -0.05
SSR4-205ENST00000447375 STK11IPQ8N1F8 1099 aa14.71□□□□□ -0.05
SSR4-205ENST00000447375 NOC4LQ9BVI4 516 aaKnown RBP14.71□□□□□ -0.05
SSR4-205ENST00000447375 WNT8AQ9H1J5 351 aa14.71□□□□□ -0.05
SSR4-205ENST00000447375 VCPKMTQ9H867 229 aa14.71□□□□□ -0.05
SSR4-205ENST00000447375 PRRC2BQ5JSZ5 2229 aaKnown RBP14.71□□□□□ -0.05
SSR4-205ENST00000447375 PRDM1O75626 825 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 FGRP09769 529 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 TTLL4Q14679 1199 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 CCDC144BQ3MJ40 725 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 BMP2KLQ5H9B9 411 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 SLC43A3Q8NBI5 491 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 RUFY2Q8WXA3 655 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 DDX11Q96FC9 970 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 SCLYQ96I15 445 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 DSCC1Q9BVC3 393 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 IL25Q9H293 177 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 SH2D4AQ9H788 454 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 ARHGEF10LQ9HCE6 1279 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.7□□□□□ -0.06
SSR4-205ENST00000447375 TMX2Q9Y320 296 aa14.7□□□□□ -0.06
SSR4-205ENST00000447375 IGKV6D-41A0A0C4DH26 115 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 VWA5AO00534 786 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 CTAGE5O15320 804 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 SSTR3P32745 418 aaPredicted RBP14.69□□□□□ -0.06
SSR4-205ENST00000447375 BEX3Q00994 111 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 TAP1Q03518 808 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 ICA1Q05084 483 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 CTDSPL2Q05D32 466 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 GRB10Q13322 594 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 ITGA7Q13683 1181 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 CXCL17Q6UXB2 119 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 FAM178BQ8IXR5 827 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 VWCEQ96DN2 955 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 TRPV6Q9H1D0 765 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 ABHD16BQ9H3Z7 469 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 INCENPQ9NQS7 918 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 FBXO28Q9NVF7 368 aa14.69□□□□□ -0.06
SSR4-205ENST00000447375 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms