RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 YEATS4O95619 227 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 VEGFAP15692 232 aaPredicted RBP10.08□□□□□ -0.8
LINC00578-204ENST00000446548 KIF5BP33176 963 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 NPY5RQ15761 445 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 LRSAM1Q6UWE0 723 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 CLEC10AQ8IUN9 316 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 DIS3L2Q8IYB7 885 aaKnown RBP10.08□□□□□ -0.8
LINC00578-204ENST00000446548 MTMR14Q8NCE2 650 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 LINC00301Q8NCQ3 95 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 AGBL3Q8NEM8 1001 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 NLGN2Q8NFZ4 835 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 SYAP1Q96A49 352 aaPredicted RBP10.08□□□□□ -0.8
LINC00578-204ENST00000446548 PHF20Q9BVI0 1012 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 DHX36Q9H2U1 1008 aaKnown RBP10.08□□□□□ -0.8
LINC00578-204ENST00000446548 FOXP1Q9H334 677 aaPredicted RBP10.08□□□□□ -0.8
LINC00578-204ENST00000446548 TOR4AQ9NXH8 423 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 MTMR4Q9NYA4 1195 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 VPS54Q9P1Q0 977 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 STX8Q9UNK0 236 aa10.08□□□□□ -0.8
LINC00578-204ENST00000446548 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 CYTH3O43739 400 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 SCG2P13521 617 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 GNAQP50148 359 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 TOB1P50616 345 aaPredicted RBP10.07□□□□□ -0.8
LINC00578-204ENST00000446548 AKAP17AQ02040 695 aaKnown RBP10.07□□□□□ -0.8
LINC00578-204ENST00000446548 RASSF7Q02833 373 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 NR5A1Q13285 461 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 PTPAQ15257 358 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 PFKFB3Q16875 520 aaPredicted RBP10.07□□□□□ -0.8
LINC00578-204ENST00000446548 SHROOM1Q2M3G4 852 aaPredicted RBP10.07□□□□□ -0.8
LINC00578-204ENST00000446548 ANO1Q5XXA6 986 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 CIAPIN1Q6FI81 312 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 NOSTRINQ8IVI9 506 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 LRRN4Q8WUT4 740 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 TNFRSF25Q93038 417 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 GOLPH3LQ9H4A5 285 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 GRPEL1Q9HAV7 217 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 ZNF70Q9UC06 446 aaPredicted RBP10.07□□□□□ -0.8
LINC00578-204ENST00000446548 PPP1R1BQ9UD71 204 aaPredicted RBP10.07□□□□□ -0.8
LINC00578-204ENST00000446548 HDAC9Q9UKV0 1011 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 BCS1LQ9Y276 419 aa10.07□□□□□ -0.8
LINC00578-204ENST00000446548 SHTN1A0MZ66 631 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 ADAMTS3O15072 1205 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 SNHG28P0DPA3 235 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 PDHBP11177 359 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 XRCC6P12956 609 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00578-204ENST00000446548 RRP1BQ14684 758 aaKnown RBP10.06□□□□□ -0.8
LINC00578-204ENST00000446548 AGERQ15109 404 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 DLGAP5Q15398 846 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 SAFBQ15424 915 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00578-204ENST00000446548 L1TD1Q5T7N2 865 aaKnown RBP10.06□□□□□ -0.8
LINC00578-204ENST00000446548 TATDN1Q6P1N9 297 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 LRRC47Q8N1G4 583 aaKnown RBP10.06□□□□□ -0.8
LINC00578-204ENST00000446548 CCDC17Q96LX7 622 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 SPZ1Q9BXG8 430 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 PI4KBQ9UBF8 816 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 PCDHA7Q9UN72 937 aa10.06□□□□□ -0.8
LINC00578-204ENST00000446548 CLRN2A0PK11 232 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 USP17L5A8MUK1 530 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 TCP10L2B9ZVM9 353 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 SPTLC2O15270 562 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 TTLL1O95922 423 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 PARP1P09874 1014 aaKnown RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 GOLGA8HP0CJ92 632 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 VARSP26640 1264 aaKnown RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 KRT2P35908 639 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 MRE11P49959 708 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 JAG1P78504 1218 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 GNL2Q13823 731 aaKnown RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 SLC39A14Q15043 492 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 STK38Q15208 465 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 SF3A1Q15459 793 aaKnown RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 NOM1Q5C9Z4 860 aaKnown RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 EARS2Q5JPH6 523 aaKnown RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 AXDND1Q5T1B0 1012 aaPredicted RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 FKBP1CQ5VVH2 108 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 USP17L2Q6R6M4 530 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 FOXP4Q8IVH2 680 aaPredicted RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 CCAR1Q8IX12 1150 aaKnown RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 ENGASEQ8NFI3 743 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 BICD2Q8TD16 824 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 KCNG4Q8TDN1 519 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 PIBF1Q8WXW3 757 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 GPKOWQ92917 476 aaPredicted RBP eCLIP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 LZTS2Q9BRK4 669 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 FUCA2Q9BTY2 467 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 CPVLQ9H3G5 476 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 CLSTN2Q9H4D0 955 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 DDX19AQ9NUU7 478 aaKnown RBP10.05□□□□□ -0.8
LINC00578-204ENST00000446548 DACT1Q9NYF0 836 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 PGAP2Q9UHJ9 254 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 MTMR7Q9Y216 660 aa10.05□□□□□ -0.8
LINC00578-204ENST00000446548 A0A1W2PQ27 194 aa10.04□□□□□ -0.8
LINC00578-204ENST00000446548 A0A1W2PQ64 194 aa10.04□□□□□ -0.8
LINC00578-204ENST00000446548 A0A1W2PQD8 194 aa10.04□□□□□ -0.8
LINC00578-204ENST00000446548 GOLGA6L4A6NEF3 574 aa10.04□□□□□ -0.8
LINC00578-204ENST00000446548 KLRF2D3W0D1 207 aa10.04□□□□□ -0.8
LINC00578-204ENST00000446548 STXBP3O00186 592 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms