RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CNR2P34972 360 aa8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 MTHFRP42898 656 aa8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 SLC39A7Q92504 469 aa8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 NXPE3Q969Y0 559 aa8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 RPGRIP1Q96KN7 1286 aa8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 CHMP4AQ9BY43 222 aa8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 ALDH8A1Q9H2A2 487 aaPredicted RBP8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 ANO1Q5XXA6 986 aa8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 PAGR1Q9BTK6 254 aa8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 MYCNP04198 464 aaPredicted RBP8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 NONOQ15233 471 aaKnown RBP eCLIP8.16□□□□□ -1.1
BRAFP1-201ENST00000445336 CTAGE5O15320 804 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 PI15O43692 258 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 CSF1RP07333 972 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 CACNB3P54284 484 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 UBE3AQ05086 875 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 MCM10Q7L590 875 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 FBXO33Q7Z6M2 555 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 ZNF843Q8N446 348 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 PRMT8Q9NR22 394 aaPredicted RBP8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 SEMA4GQ9NTN9 838 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 POLR3EQ9NVU0 708 aa8.15□□□□□ -1.1
BRAFP1-201ENST00000445336 MIA3Q5JRA6 1907 aa8.15□□□□□ -1.11
BRAFP1-201ENST00000445336 KPNA6O60684 536 aa8.15□□□□□ -1.11
BRAFP1-201ENST00000445336 CSRP3P50461 194 aa8.15□□□□□ -1.11
BRAFP1-201ENST00000445336 EP400NLQ6ZTU2 488 aa8.15□□□□□ -1.11
BRAFP1-201ENST00000445336 FLCNQ8NFG4 579 aa8.15□□□□□ -1.11
BRAFP1-201ENST00000445336 SCLYQ96I15 445 aa8.15□□□□□ -1.11
BRAFP1-201ENST00000445336 FTOQ9C0B1 505 aaKnown RBP eCLIP8.15□□□□□ -1.11
BRAFP1-201ENST00000445336 GPR108Q9NPR9 543 aa8.15□□□□□ -1.11
BRAFP1-201ENST00000445336 IGSF9Q9P2J2 1179 aa8.15□□□□□ -1.11
BRAFP1-201ENST00000445336 MAFO75444 373 aaPredicted RBP8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 FCER1AP12319 257 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 ITIH3Q06033 890 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 MAPK8IP2Q13387 824 aaPredicted RBP8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 IKBKEQ14164 716 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 SPRED2Q7Z698 418 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 METTL16Q86W50 562 aaKnown RBP8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 MAML2Q8IZL2 1156 aaPredicted RBP8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 CLP1Q92989 425 aaKnown RBP8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 VTI1AQ96AJ9 217 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 PRKAR2BP31323 418 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 NFRKBQ6P4R8 1299 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 RASGRP2Q7LDG7 609 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 ERVK-5Q9HDB9 667 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 NUDCQ9Y266 331 aa8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 ANKRD17O75179 2603 aaKnown RBP8.14□□□□□ -1.11
BRAFP1-201ENST00000445336 BMPR1AP36894 532 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 TDGQ13569 410 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 CLUL1Q15846 466 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 WDR66Q8TBY9 1149 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 KLHL5Q96PQ7 755 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 THUMPD2Q9BTF0 503 aaKnown RBP8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 MOV10L1Q9BXT6 1211 aaKnown RBP8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 GREM2Q9H772 168 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 HOXC10Q9NYD6 342 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 CEACAM1P13688 526 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 SCUBE3Q8IX30 993 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 TDRD5Q8NAT2 981 aaKnown RBP8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 FAM163AQ96GL9 167 aaPredicted RBP8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 PARP14Q460N5 1801 aa8.13□□□□□ -1.11
BRAFP1-201ENST00000445336 MCAMP43121 646 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 MTMR2Q13614 643 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 PRAMEF19Q5SWL8 479 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 SESTD1Q86VW0 696 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 SPATC1LQ9H0A9 340 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 ABHD16BQ9H3Z7 469 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 BTBD7Q9P203 1132 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 HELZ2Q9BYK8 2649 aaKnown RBP8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 KIAA1671Q9BY89 1806 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 SCN10AQ9Y5Y9 1956 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 ANKRD54Q6NXT1 300 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 DEFB128Q7Z7B8 93 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 PHACTR3Q96KR7 559 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 KNSTRNQ9Y448 316 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 EMSYQ7Z589 1322 aa8.12□□□□□ -1.11
BRAFP1-201ENST00000445336 GOLGA2Q08379 1002 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 GNASQ5JWF2 1037 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 FAM117BQ6P1L5 589 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 POTEHQ6S545 545 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 SHDQ96IW2 340 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 F5H6K3 240 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 LAMTOR5O43504 91 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 C6orf222P0C671 652 aaPredicted RBP8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 KCNC3Q14003 757 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 SH3BP5LQ7L8J4 393 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 KIAA1683Q9H0B3 1180 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 TRPV6Q9H1D0 765 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 USP40Q9NVE5 1235 aa8.11□□□□□ -1.11
BRAFP1-201ENST00000445336 MYADML2A6NDP7 307 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 SPDYE16A6NNV3 312 aaPredicted RBP8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 GLP2RO95838 553 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 DEFB103AP81534 67 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 DUSP6Q16828 381 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 TATDN1Q6P1N9 297 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 GPR20Q99678 358 aa8.1□□□□□ -1.11
BRAFP1-201ENST00000445336 EMILIN3Q9NT22 766 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms