RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 CERS4Q9HA82 394 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 MKNK2Q9HBH9 465 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 SWAP70Q9UH65 585 aa10.95□□□□□ -0.66
LINC00642-203ENST00000444942 WDR87Q6ZQQ6 2873 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 HIP1O00291 1037 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 CDC45O75419 566 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 GUCY1A2P33402 732 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
LINC00642-203ENST00000444942 BECN1Q14457 450 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 RRP12Q5JTH9 1297 aaKnown RBP10.94□□□□□ -0.66
LINC00642-203ENST00000444942 PRAMEF19Q5SWL8 479 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 OTOP2Q7RTS6 562 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 STARD7Q9NQZ5 370 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 FAM86C1Q9NVL1 165 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 SLC4A7Q9Y6M7 1214 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 LAMA4Q16363 1823 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 MROH7Q68CQ1 1323 aa10.94□□□□□ -0.66
LINC00642-203ENST00000444942 ZNF292O60281 2723 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 C19orf81C9J6K1 198 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 RAD21O60216 631 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 PGK1P00558 417 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 FGAP02671 866 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 CA3P07451 260 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 RARBP10826 455 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 CHMLP26374 656 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 GRB10Q13322 594 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 DPP9Q86TI2 863 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 ZNF444Q8N0Y2 327 aaPredicted RBP10.93□□□□□ -0.66
LINC00642-203ENST00000444942 CHMP4CQ96CF2 233 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 PPP1R12CQ9BZL4 782 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 DNAH14Q0VDD8 3507 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 CFAP47Q6ZTR5 3102 aa10.93□□□□□ -0.66
LINC00642-203ENST00000444942 USP17L10C9JJH3 530 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 SLC3A2P08195 630 aaKnown RBP10.92□□□□□ -0.66
LINC00642-203ENST00000444942 RASA1P20936 1047 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 CDK7P50613 346 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 ACLYP53396 1101 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 TMEM67Q5HYA8 995 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 PTCRAQ6ISU1 281 aaPredicted RBP10.92□□□□□ -0.66
LINC00642-203ENST00000444942 TMEM179Q6ZVK1 233 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 BMP8AQ7Z5Y6 402 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 NUP133Q8WUM0 1156 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 ARNTL2Q8WYA1 636 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 TSEN34Q9BSV6 310 aaKnown RBP10.92□□□□□ -0.66
LINC00642-203ENST00000444942 C22orf23Q9BZE7 217 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 GREB1LQ9C091 1923 aaPredicted RBP10.92□□□□□ -0.66
LINC00642-203ENST00000444942 COL4A6Q14031 1691 aa10.92□□□□□ -0.66
LINC00642-203ENST00000444942 A0A1W2PRG0 241 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 GRXCR2A6NFK2 248 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 LPXNO60711 386 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 ATP2A2P16615 1042 aaKnown RBP10.91□□□□□ -0.66
LINC00642-203ENST00000444942 ADORA2AP29274 412 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 CYP2C18P33260 490 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 ICA1Q05084 483 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 PDE4BQ07343 736 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 USP17L2Q6R6M4 530 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 RUFY2Q8WXA3 655 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 COL26A1Q96A83 441 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 CCDC17Q96LX7 622 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 EMILIN3Q9NT22 766 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 LMCD1Q9NZU5 365 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 ROBO3Q96MS0 1386 aa10.91□□□□□ -0.66
LINC00642-203ENST00000444942 MED19A0JLT2 244 aaPredicted RBP10.9□□□□□ -0.66
LINC00642-203ENST00000444942 PROB1E7EW31 1015 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 RANBP6O60518 1105 aaKnown RBP10.9□□□□□ -0.66
LINC00642-203ENST00000444942 ADAMTS4O75173 837 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 EEF2P13639 858 aaKnown RBP10.9□□□□□ -0.66
LINC00642-203ENST00000444942 KCNA5P22460 613 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 TFAP4Q01664 338 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 PTH1RQ03431 593 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 ALX1Q15699 326 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 PKN1Q16512 942 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 CASC1Q6TDU7 716 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 SPICE1Q8N0Z3 855 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 IRF2BPLQ9H1B7 796 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 ARHGEF10LQ9HCE6 1279 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 ALG13Q9NP73 1137 aaKnown RBP10.9□□□□□ -0.66
LINC00642-203ENST00000444942 GINM1Q9NU53 330 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 MTMR7Q9Y216 660 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 ZNF536O15090 1300 aa10.9□□□□□ -0.66
LINC00642-203ENST00000444942 MOXD2PA6NHM9 499 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 C19orf67A6NJJ6 358 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 TSPY2A6NKD2 308 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 ZNF213O14771 459 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 STRNO43815 780 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 TSPY3P0CV98 308 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 TSPY8P0CW00 308 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 TAP1Q03518 808 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 ZP2Q05996 745 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 PUS10Q3MIT2 529 aaKnown RBP10.9□□□□□ -0.67
LINC00642-203ENST00000444942 KIAA1755Q5JYT7 1200 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 LBX2Q6XYB7 198 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 TICAM2Q86XR7 235 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 SIAH1Q8IUQ4 282 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 TBC1D10CQ8IV04 446 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.9□□□□□ -0.67
LINC00642-203ENST00000444942 ZNF287Q9HBT7 754 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 BTBD7Q9P203 1132 aa10.9□□□□□ -0.67
LINC00642-203ENST00000444942 CLIP2Q9UDT6 1046 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms