RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 ZNF792Q3KQV3 632 aa12.96□□□□□ -0.33
HLA-F-221ENST00000444621 GJC2Q5T442 439 aaPredicted RBP12.96□□□□□ -0.33
HLA-F-221ENST00000444621 RNF20Q5VTR2 975 aa12.96□□□□□ -0.33
HLA-F-221ENST00000444621 BTNL9Q6UXG8 535 aa12.96□□□□□ -0.33
HLA-F-221ENST00000444621 SLC39A5Q6ZMH5 540 aa12.96□□□□□ -0.33
HLA-F-221ENST00000444621 ANKS1AQ92625 1134 aa12.96□□□□□ -0.33
HLA-F-221ENST00000444621 MPHOSPH6Q99547 160 aaKnown RBP12.96□□□□□ -0.33
HLA-F-221ENST00000444621 RNF146Q9NTX7 359 aa12.96□□□□□ -0.33
HLA-F-221ENST00000444621 RIPK3Q9Y572 518 aa12.96□□□□□ -0.33
HLA-F-221ENST00000444621 TNKSO95271 1327 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 SEPT4O43236 478 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 ICAM1P05362 532 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 SLC16A2P36021 539 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 PTH1RQ03431 593 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 ZNF543Q08ER8 600 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 ASPRV1Q53RT3 343 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 ZNF467Q7Z7K2 595 aaPredicted RBP12.95□□□□□ -0.34
HLA-F-221ENST00000444621 TRPV1Q8NER1 839 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 MAP4K1Q92918 833 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 AGBL1Q96MI9 1066 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
HLA-F-221ENST00000444621 SYNGAP1Q96PV0 1343 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 ASB14A6NK59 587 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 B4DLN1 442 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 KBTBD13C9JR72 458 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 E7EWF7 191 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 IFIT3O14879 490 aaKnown RBP12.94□□□□□ -0.34
HLA-F-221ENST00000444621 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
HLA-F-221ENST00000444621 CYP21A2P08686 494 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 RARBP10826 455 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 CYBAP13498 195 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 MRPL12P52815 198 aaKnown RBP12.94□□□□□ -0.34
HLA-F-221ENST00000444621 TRAF1Q13077 416 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 TRIM60Q495X7 471 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 TTBK2Q6IQ55 1244 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
HLA-F-221ENST00000444621 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 ENAHQ8N8S7 591 aaPredicted RBP12.94□□□□□ -0.34
HLA-F-221ENST00000444621 ESYT1Q9BSJ8 1104 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 RANBP17Q9H2T7 1088 aaKnown RBP12.94□□□□□ -0.34
HLA-F-221ENST00000444621 ANO2Q9NQ90 1003 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 PDLIM7Q9NR12 457 aa12.94□□□□□ -0.34
HLA-F-221ENST00000444621 ADD3Q9UEY8 706 aaKnown RBP12.94□□□□□ -0.34
HLA-F-221ENST00000444621 RBM8AQ9Y5S9 174 aaKnown RBP12.94□□□□□ -0.34
HLA-F-221ENST00000444621 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 TRIM43BA6NCK2 446 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 CDC45O75419 566 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 SNHG28P0DPA3 235 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 PLA2G5P39877 138 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 SNAP25P60880 206 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 GRIN2CQ14957 1233 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 WTAPQ15007 396 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 PRAMEF19Q5SWL8 479 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 ANO1Q5XXA6 986 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 NSMFQ6X4W1 530 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 TMTC2Q8N394 836 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
HLA-F-221ENST00000444621 SPC25Q9HBM1 224 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 FAM184BQ9ULE4 1060 aa12.93□□□□□ -0.34
HLA-F-221ENST00000444621 DNAJC25-GNG10A0A024R161 153 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 PTPDC1A2A3K4 754 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 GOLGA8HP0CJ92 632 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 AKR1A1P14550 325 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 SNX17Q15036 470 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 TMEM67Q5HYA8 995 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 MAMDC4Q6UXC1 1216 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 RNF180Q86T96 592 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 RNPC3Q96LT9 517 aaKnown RBP12.92□□□□□ -0.34
HLA-F-221ENST00000444621 IL25Q9H293 177 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 ABHD16BQ9H3Z7 469 aa12.92□□□□□ -0.34
HLA-F-221ENST00000444621 ZHX1Q9UKY1 873 aaPredicted RBP12.92□□□□□ -0.34
HLA-F-221ENST00000444621 ZNF536O15090 1300 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 MCM5P33992 734 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 ADCYAP1R1P41586 468 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 EPHB4P54760 987 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 NFXL1Q6ZNB6 911 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 MCF2L2Q86YR7 1114 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 FERMT2Q96AC1 680 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 FAM122AQ96E09 287 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 MTA3Q9BTC8 594 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 MAF1Q9H063 256 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 VAT1LQ9HCJ6 419 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 XPNPEP3Q9NQH7 507 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 PPP4R2Q9NY27 417 aa12.91□□□□□ -0.34
HLA-F-221ENST00000444621 WDR19Q8NEZ3 1342 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 LOC102724159A0A0B4J2E5 919 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 CCDC69A6NI79 296 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 IGHA2P01877 340 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 ITGB8P26012 769 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 TLE2Q04725 743 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 ACVR2BQ13705 512 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 PWP2Q15269 919 aaKnown RBP12.9□□□□□ -0.34
HLA-F-221ENST00000444621 SYNE3Q6ZMZ3 975 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 RNF207Q6ZRF8 634 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 NOL8Q76FK4 1167 aaKnown RBP12.9□□□□□ -0.34
HLA-F-221ENST00000444621 CYB5R4Q7L1T6 521 aa12.9□□□□□ -0.34
HLA-F-221ENST00000444621 ARMCX2Q7L311 632 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms