RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 PRLRP16471 622 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 PMS1P54277 932 aaKnown RBP17.23■□□□□ 0.35
AP1S3-206ENST00000443700 FOXR1Q6PIV2 292 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 AENQ8WTP8 325 aaKnown RBP17.23■□□□□ 0.35
AP1S3-206ENST00000443700 PCMTD1Q96MG8 357 aaPredicted RBP17.23■□□□□ 0.35
AP1S3-206ENST00000443700 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 GOLGA6CA6NDK9 693 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 A6NNZ2 444 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 OPA1O60313 960 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 NTSR2O95665 410 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 GOLGA6DP0CG33 693 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 GGCXP38435 758 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 MTIF2P46199 727 aaKnown RBP17.23■□□□□ 0.35
AP1S3-206ENST00000443700 PPFIA1Q13136 1202 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 TUBB8Q3ZCM7 444 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 SBK1Q52WX2 424 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 COBLL1Q53SF7 1204 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 CCDC178Q5BJE1 867 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 ALS2CR12Q96Q35 445 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 GOLGA6AQ9NYA3 693 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 SNX12Q9UMY4 172 aa17.23■□□□□ 0.35
AP1S3-206ENST00000443700 TSPY2A6NKD2 308 aa17.22■□□□□ 0.35
AP1S3-206ENST00000443700 CPP00450 1065 aa17.22■□□□□ 0.35
AP1S3-206ENST00000443700 TCP1P17987 556 aaKnown RBP17.22■□□□□ 0.35
AP1S3-206ENST00000443700 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
AP1S3-206ENST00000443700 NOP2P46087 812 aaKnown RBP17.22■□□□□ 0.35
AP1S3-206ENST00000443700 C2orf54Q08AI8 447 aa17.22■□□□□ 0.35
AP1S3-206ENST00000443700 FAM205AQ6ZU69 1335 aa17.22■□□□□ 0.35
AP1S3-206ENST00000443700 ZSCAN29Q8IWY8 852 aaPredicted RBP17.22■□□□□ 0.35
AP1S3-206ENST00000443700 CCDC155Q8N6L0 562 aa17.22■□□□□ 0.35
AP1S3-206ENST00000443700 CCDC42Q96M95 316 aa17.22■□□□□ 0.35
AP1S3-206ENST00000443700 DUSP9Q99956 384 aaKnown RBP17.22■□□□□ 0.35
AP1S3-206ENST00000443700 NOC4LQ9BVI4 516 aaKnown RBP17.22■□□□□ 0.35
AP1S3-206ENST00000443700 CCDC87Q9NVE4 849 aa17.22■□□□□ 0.35
AP1S3-206ENST00000443700 SMIM22K7EJ46 135 aa17.21■□□□□ 0.35
AP1S3-206ENST00000443700 HNRNPH3P31942 346 aaKnown RBP17.21■□□□□ 0.35
AP1S3-206ENST00000443700 GYG1P46976 350 aa17.21■□□□□ 0.35
AP1S3-206ENST00000443700 EPHB4P54760 987 aa17.21■□□□□ 0.35
AP1S3-206ENST00000443700 AMPD3Q01432 767 aa17.21■□□□□ 0.35
AP1S3-206ENST00000443700 LACRTQ9GZZ8 138 aa17.21■□□□□ 0.35
AP1S3-206ENST00000443700 TCP11L1Q9NUJ3 509 aa17.21■□□□□ 0.35
AP1S3-206ENST00000443700 AGPAT5Q9NUQ2 364 aa17.21■□□□□ 0.35
AP1S3-206ENST00000443700 HYOU1Q9Y4L1 999 aa17.21■□□□□ 0.35
AP1S3-206ENST00000443700 COL14A1Q05707 1796 aaKnown RBP17.21■□□□□ 0.35
AP1S3-206ENST00000443700 ABCB11O95342 1321 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 A0A087WUV0 522 aaPredicted RBP17.2■□□□□ 0.34
AP1S3-206ENST00000443700 TNFRSF8P28908 595 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 PDE4DQ08499 809 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 CNNM4Q6P4Q7 775 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 ANKRD18AQ8IVF6 992 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 SHTN1A0MZ66 631 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 MACROD2A1Z1Q3 448 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 RCCD1A6NED2 376 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 M0R2N6 131 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 CLSTN1O94985 981 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 EMBQ6PCB8 327 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 CABP7Q86V35 215 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 ZFP91Q96JP5 570 aaPredicted RBP17.2■□□□□ 0.34
AP1S3-206ENST00000443700 RUFY1Q96T51 708 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 C7orf25Q9BPX7 421 aa17.2■□□□□ 0.34
AP1S3-206ENST00000443700 DCP1AQ9NPI6 582 aaPredicted RBP17.2■□□□□ 0.34
AP1S3-206ENST00000443700 AGPSO00116 658 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 PDE2AO00408 941 aaPredicted RBP17.19■□□□□ 0.34
AP1S3-206ENST00000443700 CAMTA2O94983 1202 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 FGFR1OPO95684 399 aaKnown RBP17.19■□□□□ 0.34
AP1S3-206ENST00000443700 GRM4Q14833 912 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 FAM47AQ5JRC9 791 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 CCDC181Q5TID7 509 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 DGKHQ86XP1 1220 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 IFIH1Q9BYX4 1025 aaKnown RBP17.19■□□□□ 0.34
AP1S3-206ENST00000443700 LRWD1Q9UFC0 647 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 TSKSQ9UJT2 592 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 TFR2Q9UP52 801 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
AP1S3-206ENST00000443700 ZNF185O15231 689 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 NMT2O60551 498 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 LCA5LO95447 670 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 ADAMTS2O95450 1211 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 MYBL2P10244 700 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 EPB41P11171 864 aaKnown RBP17.18■□□□□ 0.34
AP1S3-206ENST00000443700 ORC2Q13416 577 aaPredicted RBP17.18■□□□□ 0.34
AP1S3-206ENST00000443700 NNTQ13423 1086 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 MIIPQ5JXC2 388 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 ALS2CLQ60I27 953 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 TADA2BQ86TJ2 420 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 GSPT2Q8IYD1 628 aaKnown RBP17.18■□□□□ 0.34
AP1S3-206ENST00000443700 ANKS1AQ92625 1134 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 GPKOWQ92917 476 aaPredicted RBP eCLIP17.18■□□□□ 0.34
AP1S3-206ENST00000443700 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
AP1S3-206ENST00000443700 CAPS2Q9BXY5 557 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 TRIM9Q9C026 710 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 PCDHA6Q9UN73 950 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 PLAGL2Q9UPG8 496 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 NIP7Q9Y221 180 aaKnown RBP eCLIP17.18■□□□□ 0.34
AP1S3-206ENST00000443700 ZNF652Q9Y2D9 606 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 PCDHA8Q9Y5H6 950 aa17.18■□□□□ 0.34
AP1S3-206ENST00000443700 FLT1P17948 1338 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms