RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ABLIM1O14639 778 aa7.45□□□□□ -1.22
VPS50-206ENST00000443443 VIPR1P32241 457 aa7.45□□□□□ -1.22
VPS50-206ENST00000443443 ERVFRD-1P60508 538 aa7.45□□□□□ -1.22
VPS50-206ENST00000443443 VHLLQ6RSH7 139 aa7.45□□□□□ -1.22
VPS50-206ENST00000443443 C1QL4Q86Z23 238 aa7.45□□□□□ -1.22
VPS50-206ENST00000443443 KLHL25Q9H0H3 589 aa7.45□□□□□ -1.22
VPS50-206ENST00000443443 CAPN10Q9HC96 672 aa7.45□□□□□ -1.22
VPS50-206ENST00000443443 ACSL6Q9UKU0 697 aa7.45□□□□□ -1.22
VPS50-206ENST00000443443 FGF10O15520 208 aaPredicted RBP7.44□□□□□ -1.22
VPS50-206ENST00000443443 TMEM62Q0P6H9 643 aa7.44□□□□□ -1.22
VPS50-206ENST00000443443 FBLN7Q53RD9 439 aa7.44□□□□□ -1.22
VPS50-206ENST00000443443 CYP2R1Q6VVX0 501 aa7.44□□□□□ -1.22
VPS50-206ENST00000443443 FAM169BQ8N8A8 192 aa7.44□□□□□ -1.22
VPS50-206ENST00000443443 PTCHD1Q96NR3 888 aa7.44□□□□□ -1.22
VPS50-206ENST00000443443 GCM1Q9NP62 436 aa7.44□□□□□ -1.22
VPS50-206ENST00000443443 STRIP2Q9ULQ0 834 aa7.44□□□□□ -1.22
VPS50-206ENST00000443443 ATF4P18848 351 aaPredicted RBP7.43□□□□□ -1.22
VPS50-206ENST00000443443 CEBPAP49715 358 aaPredicted RBP7.43□□□□□ -1.22
VPS50-206ENST00000443443 CASP7P55210 303 aa7.43□□□□□ -1.22
VPS50-206ENST00000443443 MVKQ03426 396 aa7.43□□□□□ -1.22
VPS50-206ENST00000443443 LCNL1Q6ZST4 164 aa7.43□□□□□ -1.22
VPS50-206ENST00000443443 SIAH1Q8IUQ4 282 aa7.43□□□□□ -1.22
VPS50-206ENST00000443443 KLHL6Q8WZ60 621 aa7.43□□□□□ -1.22
VPS50-206ENST00000443443 PPP1R14AQ96A00 147 aa7.43□□□□□ -1.22
VPS50-206ENST00000443443 KLHL14Q9P2G3 628 aa7.43□□□□□ -1.22
VPS50-206ENST00000443443 MBD1Q9UIS9 605 aaPredicted RBP7.43□□□□□ -1.22
VPS50-206ENST00000443443 KCTD3Q9Y597 815 aa7.43□□□□□ -1.22
VPS50-206ENST00000443443 MRVI1Q9Y6F6 885 aa7.43□□□□□ -1.22
VPS50-206ENST00000443443 STXBP3O00186 592 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 HRKO00198 91 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 SSBP05455 408 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS50-206ENST00000443443 MSL3P1P0C860 447 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 SEPHS1P49903 392 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 YBX1P67809 324 aaKnown RBP7.42□□□□□ -1.22
VPS50-206ENST00000443443 AMPD2Q01433 879 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 ZNF385BQ569K4 471 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 BICRALQ6AI39 1079 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 TMC6Q7Z403 805 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 APBA2Q99767 749 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 CNTD2Q9H8S5 307 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 AKT3Q9Y243 479 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 IRAK3Q9Y616 596 aa7.42□□□□□ -1.22
VPS50-206ENST00000443443 ANKRD34BA5PLL1 514 aa7.41□□□□□ -1.22
VPS50-206ENST00000443443 RFXAPO00287 272 aa7.41□□□□□ -1.22
VPS50-206ENST00000443443 TACR1P25103 407 aa7.41□□□□□ -1.22
VPS50-206ENST00000443443 L1CAMP32004 1257 aa7.41□□□□□ -1.22
VPS50-206ENST00000443443 GNL2Q13823 731 aaKnown RBP7.41□□□□□ -1.22
VPS50-206ENST00000443443 EEF1DP3Q658K8 133 aa7.41□□□□□ -1.22
VPS50-206ENST00000443443 ZNF428Q96B54 188 aa7.41□□□□□ -1.22
VPS50-206ENST00000443443 MCMBPQ9BTE3 642 aa7.41□□□□□ -1.22
VPS50-206ENST00000443443 PDLIM7Q9NR12 457 aa7.41□□□□□ -1.22
VPS50-206ENST00000443443 CGGBP1Q9UFW8 167 aaPredicted RBP7.41□□□□□ -1.22
VPS50-206ENST00000443443 C2orf71A6NGG8 1288 aa7.4□□□□□ -1.22
VPS50-206ENST00000443443 AURKAO14965 403 aa7.4□□□□□ -1.22
VPS50-206ENST00000443443 EPHB3P54753 998 aa7.4□□□□□ -1.22
VPS50-206ENST00000443443 SSPNQ14714 243 aa7.4□□□□□ -1.22
VPS50-206ENST00000443443 NR1I3Q14994 352 aa7.4□□□□□ -1.22
VPS50-206ENST00000443443 ARHGEF39Q8N4T4 335 aa7.4□□□□□ -1.22
VPS50-206ENST00000443443 SIGLEC10Q96LC7 697 aa7.4□□□□□ -1.22
VPS50-206ENST00000443443 TNFRSF12AQ9NP84 129 aa7.4□□□□□ -1.22
VPS50-206ENST00000443443 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.22
VPS50-206ENST00000443443 NOP56O00567 594 aaKnown RBP7.39□□□□□ -1.23
VPS50-206ENST00000443443 N4BP3O15049 544 aa7.39□□□□□ -1.23
VPS50-206ENST00000443443 SMAD7O15105 426 aaKnown RBP7.39□□□□□ -1.23
VPS50-206ENST00000443443 KCNH1O95259 989 aa7.39□□□□□ -1.23
VPS50-206ENST00000443443 TCF3P15923 654 aa7.39□□□□□ -1.23
VPS50-206ENST00000443443 RCSD1Q6JBY9 416 aa7.39□□□□□ -1.23
VPS50-206ENST00000443443 RPTNQ6XPR3 784 aa7.39□□□□□ -1.23
VPS50-206ENST00000443443 AMIGO3Q86WK7 504 aa7.39□□□□□ -1.23
VPS50-206ENST00000443443 CPNE8Q86YQ8 564 aa7.39□□□□□ -1.23
VPS50-206ENST00000443443 PANK1Q8TE04 598 aa7.39□□□□□ -1.23
VPS50-206ENST00000443443 MZB1Q8WU39 189 aa7.39□□□□□ -1.23
VPS50-206ENST00000443443 RCC1LQ96I51 464 aaKnown RBP7.39□□□□□ -1.23
VPS50-206ENST00000443443 F8W031 263 aaPredicted RBP7.38□□□□□ -1.23
VPS50-206ENST00000443443 NAT2P11245 290 aa7.38□□□□□ -1.23
VPS50-206ENST00000443443 PI3P19957 117 aa7.38□□□□□ -1.23
VPS50-206ENST00000443443 RBM25P49756 843 aaKnown RBP7.38□□□□□ -1.23
VPS50-206ENST00000443443 CDR1P51861 262 aa7.38□□□□□ -1.23
VPS50-206ENST00000443443 NCKAP1LP55160 1127 aa7.38□□□□□ -1.23
VPS50-206ENST00000443443 CBX2Q14781 532 aaPredicted RBP7.38□□□□□ -1.23
VPS50-206ENST00000443443 NCAPHQ15003 741 aa7.38□□□□□ -1.23
VPS50-206ENST00000443443 LARP1BQ659C4 914 aaKnown RBP7.38□□□□□ -1.23
VPS50-206ENST00000443443 ZC3H14Q6PJT7 736 aaKnown RBP7.38□□□□□ -1.23
VPS50-206ENST00000443443 LDHDQ86WU2 507 aa7.38□□□□□ -1.23
VPS50-206ENST00000443443 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.38□□□□□ -1.23
VPS50-206ENST00000443443 APEX2Q9UBZ4 518 aa7.38□□□□□ -1.23
VPS50-206ENST00000443443 SUSD2Q9UGT4 822 aa7.38□□□□□ -1.23
VPS50-206ENST00000443443 BACE2Q9Y5Z0 518 aa7.38□□□□□ -1.23
VPS50-206ENST00000443443 NPHP3-ACAD11A0A0J9YXS1 232 aa7.37□□□□□ -1.23
VPS50-206ENST00000443443 GRB10Q13322 594 aa7.37□□□□□ -1.23
VPS50-206ENST00000443443 TCERG1LQ5VWI1 586 aa7.37□□□□□ -1.23
VPS50-206ENST00000443443 POMZP3Q6PJE2 187 aa7.37□□□□□ -1.23
VPS50-206ENST00000443443 PAQR3Q6TCH7 311 aa7.37□□□□□ -1.23
VPS50-206ENST00000443443 CRACR2BQ8N4Y2 399 aaPredicted RBP7.37□□□□□ -1.23
VPS50-206ENST00000443443 BVESQ8NE79 360 aa7.37□□□□□ -1.23
VPS50-206ENST00000443443 USP33Q8TEY7 942 aa7.37□□□□□ -1.23
VPS50-206ENST00000443443 CYBBP04839 570 aa7.36□□□□□ -1.23
VPS50-206ENST00000443443 DBHP09172 617 aa7.36□□□□□ -1.23
VPS50-206ENST00000443443 BMP7P18075 431 aa7.36□□□□□ -1.23
VPS50-206ENST00000443443 PAMP19021 973 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms