RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 G2E3Q7L622 706 aa17.08■□□□□ 0.33
CDH23-207ENST00000442677 PPM1KQ8N3J5 372 aa17.08■□□□□ 0.33
CDH23-207ENST00000442677 RNF217Q8TC41 542 aa17.08■□□□□ 0.33
CDH23-207ENST00000442677 HEXIM1O94992 359 aaKnown RBP17.08■□□□□ 0.32
CDH23-207ENST00000442677 PCYT1AP49585 367 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 EPHB4P54760 987 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 EIF4A2Q14240 407 aaKnown RBP17.08■□□□□ 0.32
CDH23-207ENST00000442677 OLA1Q9NTK5 396 aaKnown RBP17.08■□□□□ 0.32
CDH23-207ENST00000442677 GOLGA8QA0A0J9YX86 632 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 GOLGA8OA6NCC3 632 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 GOLGA8NF8WBI6 632 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDH23-207ENST00000442677 CASP14P31944 242 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 RAP1GDS1P52306 607 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 CHAMP1Q96JM3 812 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 GPHNQ9NQX3 736 aaPredicted RBP17.08■□□□□ 0.32
CDH23-207ENST00000442677 DAB2P98082 770 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 AZI2Q9H6S1 392 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 MYSM1Q5VVJ2 828 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 KCNV2Q8TDN2 545 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 ATP6V1E2Q96A05 226 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 ANKRD2Q9GZV1 360 aa17.08■□□□□ 0.32
CDH23-207ENST00000442677 METTL13Q8N6R0 699 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 BBOF1Q8ND07 529 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 RMDN2Q96LZ7 410 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 PACSIN2Q9UNF0 486 aaPredicted RBP17.07■□□□□ 0.32
CDH23-207ENST00000442677 E7EWF7 191 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 CREB3O43889 395 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 PKP1Q13835 747 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 MCTP2Q6DN12 878 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 PICK1Q9NRD5 415 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 NOVA2Q9UNW9 492 aaKnown RBP17.07■□□□□ 0.32
CDH23-207ENST00000442677 LMNB1P20700 586 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 ITGA6P23229 1130 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 RNASELQ05823 741 aaKnown RBP17.07■□□□□ 0.32
CDH23-207ENST00000442677 RAB44Q7Z6P3 723 aaPredicted RBP17.07■□□□□ 0.32
CDH23-207ENST00000442677 SH2D4AQ9H788 454 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 TMOD4Q9NZQ9 345 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 RPN1P04843 607 aaKnown RBP17.07■□□□□ 0.32
CDH23-207ENST00000442677 MCF2P10911 925 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 YWHAEP62258 255 aaKnown RBP17.07■□□□□ 0.32
CDH23-207ENST00000442677 CFAP36Q96G28 342 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 FAM89AQ96GI7 184 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 ANAPC5Q9UJX4 755 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 H0Y3Z8 333 aa17.07■□□□□ 0.32
CDH23-207ENST00000442677 SLC4A1P02730 911 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 ESRRAP11474 423 aaPredicted RBP17.06■□□□□ 0.32
CDH23-207ENST00000442677 KIF11P52732 1056 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 ACTR5Q9H9F9 607 aaPredicted RBP17.06■□□□□ 0.32
CDH23-207ENST00000442677 METTL14Q9HCE5 456 aaKnown RBP17.06■□□□□ 0.32
CDH23-207ENST00000442677 H3BRJ5 948 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 RBL2Q08999 1139 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 ARHGEF18Q6ZSZ5 1173 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 TRIM59Q8IWR1 403 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 C1orf112Q9NSG2 853 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 K7ENM7 598 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
CDH23-207ENST00000442677 IQCB1Q15051 598 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 USP28Q96RU2 1077 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 TRAIPQ9BWF2 469 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 SPC25Q9HBM1 224 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 ARMCX3Q9UH62 379 aaPredicted RBP17.06■□□□□ 0.32
CDH23-207ENST00000442677 MOCS3O95396 460 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 SLC1A4P43007 532 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 PRPSAP1Q14558 356 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 IPO11Q9UI26 975 aaKnown RBP17.06■□□□□ 0.32
CDH23-207ENST00000442677 CLIC4Q9Y696 253 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 SMCO2A6NFE2 343 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 BRD1O95696 1058 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 LMNB2Q03252 620 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 DNAJC6O75061 913 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 SPOUT1Q5T280 376 aaKnown RBP17.06■□□□□ 0.32
CDH23-207ENST00000442677 PGBD1Q96JS3 809 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 DAAM1Q9Y4D1 1078 aa17.06■□□□□ 0.32
CDH23-207ENST00000442677 KDM3AQ9Y4C1 1321 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 SPDYE2BA6NHP3 402 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 SPDYE6P0CI01 402 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 TMOD1P28289 359 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 TCP10Q12799 353 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 TPTE2Q6XPS3 522 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 RUNDC3BQ96NL0 473 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
CDH23-207ENST00000442677 H2AFZP0C0S5 128 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 PUM3Q15397 648 aaKnown RBP17.05■□□□□ 0.32
CDH23-207ENST00000442677 H2AFVQ71UI9 128 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.05■□□□□ 0.32
CDH23-207ENST00000442677 DEPTORQ8TB45 409 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
CDH23-207ENST00000442677 PIK3CAP42336 1068 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 TRIP13Q15645 432 aaPredicted RBP17.05■□□□□ 0.32
CDH23-207ENST00000442677 REXO1Q8N1G1 1221 aaKnown RBP17.05■□□□□ 0.32
CDH23-207ENST00000442677 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 PARD6BQ9BYG5 372 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 SFMBT1Q9UHJ3 866 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 HMGB1P1B2RPK0 211 aaPredicted RBP17.05■□□□□ 0.32
CDH23-207ENST00000442677 TAF5LO75529 589 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 LIG4P49917 911 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 SAAL1Q96ER3 474 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 GAS7O60861 476 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 COPB1P53618 953 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms