RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CLIP2Q9UDT6 1046 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 JAG2Q9Y219 1238 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 ESYT2A0FGR8 921 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 TNFRSF10AO00220 468 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 NPM3O75607 178 aaKnown RBP10.39□□□□□ -0.75
HDAC6-209ENST00000440653 SMC2O95347 1197 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 HLA-DOAP06340 250 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 GJA5P36382 358 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 TXLNAP40222 546 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 CDK8P49336 464 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 NLRP5P59047 1200 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 HDLBPQ00341 1268 aaKnown RBP10.39□□□□□ -0.75
HDAC6-209ENST00000440653 MYL5Q02045 173 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 POSTNQ15063 836 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 DPCR1Q3MIW9 517 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 ASPRV1Q53RT3 343 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 NT5DC1Q5TFE4 455 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 PODNQ7Z5L7 613 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 DRC7Q8IY82 874 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 CCDC150Q8NCX0 1101 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 TEKT1Q969V4 418 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 SPTLC3Q9NUV7 552 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 ZMYND8Q9ULU4 1186 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-209ENST00000440653 PCDHA4Q9UN74 947 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 PCDHB6Q9Y5E3 794 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 V9GY48 417 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-209ENST00000440653 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
HDAC6-209ENST00000440653 PALM3A6NDB9 673 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-209ENST00000440653 AP5Z1O43299 807 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 NMT2O60551 498 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 FARP2O94887 1054 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-209ENST00000440653 PARP1P09874 1014 aaKnown RBP10.38□□□□□ -0.75
HDAC6-209ENST00000440653 NF2P35240 595 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 GTF2IP78347 998 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 NPY5RQ15761 445 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 KRT25Q7Z3Z0 450 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 METTL16Q86W50 562 aaKnown RBP10.38□□□□□ -0.75
HDAC6-209ENST00000440653 BLIDQ8IZY5 108 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 CMTR1Q8N1G2 835 aaKnown RBP10.38□□□□□ -0.75
HDAC6-209ENST00000440653 CCDC82Q8N4S0 544 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 MLKLQ8NB16 471 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 TMEM47Q9BQJ4 181 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 MRIQ9BWK5 157 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 CABP5Q9NP86 173 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 IL17RBQ9NRM6 502 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 SEC63Q9UGP8 760 aaKnown RBP10.38□□□□□ -0.75
HDAC6-209ENST00000440653 MAD2L2Q9UI95 211 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 STX8Q9UNK0 236 aa10.38□□□□□ -0.75
HDAC6-209ENST00000440653 CCDC194A0A1B0GVG4 234 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 G3V3G9 751 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 POTEB2H3BUK9 544 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 SMIM22K7EJ46 135 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 ACTN4O43707 911 aaKnown RBP10.37□□□□□ -0.75
HDAC6-209ENST00000440653 GJB1P08034 283 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 ZBTB48P10074 688 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-209ENST00000440653 CCL5P13501 91 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 GNA11P29992 359 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 LONP1P36776 959 aaKnown RBP10.37□□□□□ -0.75
HDAC6-209ENST00000440653 GABPAQ06546 454 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 GRIK5Q16478 980 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 DCAF8Q5TAQ9 597 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 TDHQ8IZJ6 230 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 SYMPKQ92797 1274 aaKnown RBP10.37□□□□□ -0.75
HDAC6-209ENST00000440653 SMARCE1Q969G3 411 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 RRP36Q96EU6 259 aaKnown RBP10.37□□□□□ -0.75
HDAC6-209ENST00000440653 DYNLL2Q96FJ2 89 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 NAP1L5Q96NT1 182 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-209ENST00000440653 CLIC6Q96NY7 704 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 MAGEF1Q9HAY2 307 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 BARHL2Q9NY43 387 aa10.37□□□□□ -0.75
HDAC6-209ENST00000440653 STXBP3O00186 592 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 MYL1P05976 194 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 SLFN14P0C7P3 912 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 PRPHP41219 470 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 KCNJ6P48051 423 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 PLCD1P51178 756 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 ARHGEF6Q15052 776 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 STRIP1Q5VSL9 837 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 RSBN1LQ6PCB5 846 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-209ENST00000440653 MAFAQ8NHW3 353 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-209ENST00000440653 KIAA1524Q8TCG1 905 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 PRIMPOLQ96LW4 560 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 CCDC17Q96LX7 622 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 ZDHHC15Q96MV8 337 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 GMLQ99445 158 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 GTPBP4Q9BZE4 634 aaKnown RBP10.36□□□□□ -0.75
HDAC6-209ENST00000440653 OSBPL5Q9H0X9 879 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-209ENST00000440653 CSRNP2Q9H175 543 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 DHX36Q9H2U1 1008 aaKnown RBP10.36□□□□□ -0.75
HDAC6-209ENST00000440653 SAP30BPQ9UHR5 308 aaKnown RBP10.36□□□□□ -0.75
HDAC6-209ENST00000440653 SERPINB13Q9UIV8 391 aa10.36□□□□□ -0.75
HDAC6-209ENST00000440653 TTF2Q9UNY4 1162 aaKnown RBP10.36□□□□□ -0.75
HDAC6-209ENST00000440653 IGKV6D-41A0A0C4DH26 115 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 USP17L3A6NCW0 530 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 USP17L4A6NCW7 530 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 POLR2DO15514 142 aaKnown RBP10.35□□□□□ -0.75
HDAC6-209ENST00000440653 SYN1P17600 705 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 PTGS1P23219 599 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms