RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 MAP3K14Q99558 947 aa20.98■□□□□ 0.95
CPSF4-205ENST00000440514 PAK6Q9NQU5 681 aaPredicted RBP20.98■□□□□ 0.95
CPSF4-205ENST00000440514 GTF3C3Q9Y5Q9 886 aa20.98■□□□□ 0.95
CPSF4-205ENST00000440514 KIAA0100Q14667 2235 aaKnown RBP20.98■□□□□ 0.95
CPSF4-205ENST00000440514 RPTORQ8N122 1335 aa20.98■□□□□ 0.95
CPSF4-205ENST00000440514 FRMPD3Q5JV73 1810 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 KLF18A0A0U1RQI7 1052 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 PPP1R11O60927 126 aaPredicted RBP20.97■□□□□ 0.95
CPSF4-205ENST00000440514 CALM1P0DP23 149 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 CALM2P0DP24 149 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 CALM3P0DP25 149 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 PSMA5P28066 241 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 KIF5BP33176 963 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 FGD1P98174 961 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 CNTN2Q02246 1040 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 Q6ZUG5 572 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 CLEC4DQ8WXI8 215 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 SHISA4Q96DD7 197 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 MTMR8Q96EF0 704 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 DEFB118Q96PH6 123 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 PIGSQ96S52 555 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 RIOX1Q9H6W3 641 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 HMX1Q9NP08 348 aaPredicted RBP20.97■□□□□ 0.95
CPSF4-205ENST00000440514 CYP39A1Q9NYL5 469 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 LRRC37A2A6NM11 1700 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 PFASO15067 1338 aa20.97■□□□□ 0.95
CPSF4-205ENST00000440514 BRCA2P51587 3418 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 POTEB2H3BUK9 544 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 GJB1P08034 283 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 CYBAP13498 195 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 SLC30A10Q6XR72 485 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 FBXO11Q86XK2 927 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 CMTR1Q8N1G2 835 aaKnown RBP20.96■□□□□ 0.95
CPSF4-205ENST00000440514 TRPV1Q8NER1 839 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 PIBF1Q8WXW3 757 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 BRF1Q92994 677 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 UPF3BQ9BZI7 483 aaKnown RBP20.96■□□□□ 0.95
CPSF4-205ENST00000440514 PNMA2Q9UL42 364 aa20.96■□□□□ 0.95
CPSF4-205ENST00000440514 DIS3Q9Y2L1 958 aaKnown RBP20.96■□□□□ 0.95
CPSF4-205ENST00000440514 BAZ2BQ9UIF8 2168 aaKnown RBP20.95■□□□□ 0.94
CPSF4-205ENST00000440514 ZBTB5O15062 677 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 APOBRQ0VD83 1088 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 PRAMEF19Q5SWL8 479 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 SYNE3Q6ZMZ3 975 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 FAM133AQ8N9E0 248 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 U2AF1L4Q8WU68 220 aaKnown RBP20.95■□□□□ 0.94
CPSF4-205ENST00000440514 PURBQ96QR8 312 aaKnown RBP20.95■□□□□ 0.94
CPSF4-205ENST00000440514 TINF2Q9BSI4 451 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 SPZ1Q9BXG8 430 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 ZSWIM6Q9HCJ5 1215 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 NAP1L2Q9ULW6 460 aaPredicted RBP20.95■□□□□ 0.94
CPSF4-205ENST00000440514 ASTN1O14525 1302 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 ABCB11O95342 1321 aa20.95■□□□□ 0.94
CPSF4-205ENST00000440514 MCM3APO60318 1980 aa20.94■□□□□ 0.94
CPSF4-205ENST00000440514 PTPDC1A2A3K4 754 aa20.94■□□□□ 0.94
CPSF4-205ENST00000440514 SOWAHBA6NEL2 793 aa20.94■□□□□ 0.94
CPSF4-205ENST00000440514 ZBTB43O43298 467 aa20.94■□□□□ 0.94
CPSF4-205ENST00000440514 GJA8P48165 433 aa20.94■□□□□ 0.94
CPSF4-205ENST00000440514 BAATQ14032 418 aaPredicted RBP20.94■□□□□ 0.94
CPSF4-205ENST00000440514 TMTC3Q6ZXV5 915 aa20.94■□□□□ 0.94
CPSF4-205ENST00000440514 RUFY3Q7L099 469 aa20.94■□□□□ 0.94
CPSF4-205ENST00000440514 SRBD1Q8N5C6 995 aaKnown RBP20.94■□□□□ 0.94
CPSF4-205ENST00000440514 FANCBQ8NB91 859 aa20.94■□□□□ 0.94
CPSF4-205ENST00000440514 AMNQ9BXJ7 453 aa20.94■□□□□ 0.94
CPSF4-205ENST00000440514 GOLGA8AA7E2F4 631 aa20.93■□□□□ 0.94
CPSF4-205ENST00000440514 GOLGA8BA8MQT2 603 aa20.93■□□□□ 0.94
CPSF4-205ENST00000440514 CALML3P27482 149 aa20.93■□□□□ 0.94
CPSF4-205ENST00000440514 TM6SF1Q9BZW5 370 aa20.93■□□□□ 0.94
CPSF4-205ENST00000440514 CYP46A1Q9Y6A2 500 aa20.93■□□□□ 0.94
CPSF4-205ENST00000440514 DDX49Q9Y6V7 483 aaKnown RBP20.93■□□□□ 0.94
CPSF4-205ENST00000440514 SGPL1O95470 568 aa20.92■□□□□ 0.94
CPSF4-205ENST00000440514 CNGA1P29973 690 aa20.92■□□□□ 0.94
CPSF4-205ENST00000440514 GNAQP50148 359 aa20.92■□□□□ 0.94
CPSF4-205ENST00000440514 RTN1Q16799 776 aa20.92■□□□□ 0.94
CPSF4-205ENST00000440514 RNF207Q6ZRF8 634 aa20.92■□□□□ 0.94
CPSF4-205ENST00000440514 ZNF467Q7Z7K2 595 aaPredicted RBP20.92■□□□□ 0.94
CPSF4-205ENST00000440514 AGXT2Q9BYV1 514 aa20.92■□□□□ 0.94
CPSF4-205ENST00000440514 PNMA6FA0A0J9YX94 578 aa20.91■□□□□ 0.94
CPSF4-205ENST00000440514 RGS19P49795 217 aa20.91■□□□□ 0.94
CPSF4-205ENST00000440514 TOB2Q14106 344 aaPredicted RBP20.91■□□□□ 0.94
CPSF4-205ENST00000440514 MAMDC4Q6UXC1 1216 aa20.91■□□□□ 0.94
CPSF4-205ENST00000440514 CCDC82Q8N4S0 544 aa20.91■□□□□ 0.94
CPSF4-205ENST00000440514 CNTNAP5Q8WYK1 1306 aa20.91■□□□□ 0.94
CPSF4-205ENST00000440514 TBC1D5Q92609 795 aa20.91■□□□□ 0.94
CPSF4-205ENST00000440514 RRP36Q96EU6 259 aaKnown RBP20.91■□□□□ 0.94
CPSF4-205ENST00000440514 SYNGAP1Q96PV0 1343 aa20.91■□□□□ 0.94
CPSF4-205ENST00000440514 LZTS2Q9BRK4 669 aa20.91■□□□□ 0.94
CPSF4-205ENST00000440514 MRPL11Q9Y3B7 192 aaKnown RBP20.91■□□□□ 0.94
CPSF4-205ENST00000440514 PCDHA1Q9Y5I3 950 aa20.91■□□□□ 0.94
CPSF4-205ENST00000440514 hCG_1642624A0A1W2PR95 340 aa20.9■□□□□ 0.94
CPSF4-205ENST00000440514 OPLAHO14841 1288 aa20.9■□□□□ 0.94
CPSF4-205ENST00000440514 SNAI1O95863 264 aaPredicted RBP20.9■□□□□ 0.94
CPSF4-205ENST00000440514 ANAPC15P60006 121 aa20.9■□□□□ 0.94
CPSF4-205ENST00000440514 RPS6P62753 249 aaKnown RBP20.9■□□□□ 0.94
CPSF4-205ENST00000440514 ARMCX2Q7L311 632 aa20.9■□□□□ 0.94
CPSF4-205ENST00000440514 FBXL16Q8N461 479 aa20.9■□□□□ 0.94
CPSF4-205ENST00000440514 MSL3Q8N5Y2 521 aaKnown RBP20.9■□□□□ 0.94
CPSF4-205ENST00000440514 CRISPLD2Q9H0B8 497 aa20.9■□□□□ 0.94
CPSF4-205ENST00000440514 RBM28Q9NW13 759 aaKnown RBP20.9■□□□□ 0.94
CPSF4-205ENST00000440514 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms