RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 UNC5AQ6ZN44 842 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 LSRQ86X29 649 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 NUP43Q8NFH3 380 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 RASGRP4Q8TDF6 673 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 SHISA4Q96DD7 197 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 SIGLEC10Q96LC7 697 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 SRRTQ9BXP5 876 aaKnown RBP4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 GP6Q9HCN6 339 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 USP35Q9P2H5 1018 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 ZNF214Q9UL59 606 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 PPT2Q9UMR5 302 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 DIS3Q9Y2L1 958 aaKnown RBP4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 CLSPNQ9HAW4 1339 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 CCNB3Q8WWL7 1395 aa4.9□□□□□ -1.63
HMGB3P11-201ENST00000440127 CUL7Q14999 1698 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 GAPVD1Q14C86 1478 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 TRBV23OR9-2A0A075B6M9 112 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 PPM1BO75688 479 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 KRT1P04264 644 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 GSTM1P09488 218 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 ACRP10323 421 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 PRKCAP17252 672 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 CD247P20963 164 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 YBX1P67809 324 aaKnown RBP4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 RAB3GAP1Q15042 981 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 TDRD10Q5VZ19 366 aaKnown RBP4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 ERICH6BQ5W0A0 696 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 SLCO6A1Q86UG4 719 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 CABP7Q86V35 215 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 SIRT2Q8IXJ6 389 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 FIBCD1Q8N539 461 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 SEC16BQ96JE7 1060 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 CCSER2Q9H7U1 834 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 AP5S1Q9NUS5 200 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 EFR3BQ9Y2G0 817 aa4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P11-201ENST00000440127 C9IYK1 514 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 CTSKP43235 329 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 SLC7A5Q01650 507 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 GNPTABQ3T906 1256 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 EEF1DP3Q658K8 133 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 HEATR6Q6AI08 1181 aaKnown RBP4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 C1QL4Q86Z23 238 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 CILP2Q8IUL8 1156 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 KRTAP4-11Q9BYQ6 195 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 TGIF2Q9GZN2 237 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 GINM1Q9NU53 330 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 EBF1Q9UH73 591 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 ACSL6Q9UKU0 697 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 KCTD3Q9Y597 815 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 LRRC9Q6ZRR7 1453 aa4.88□□□□□ -1.63
HMGB3P11-201ENST00000440127 EFCAB5A4FU69 1503 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 TIAM1Q13009 1591 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 MYOCOSA0A1B0GUC4 107 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 NOTOA8MTQ0 251 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 N4BP3O15049 544 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 TP53P04637 393 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 CD3EP07766 207 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 PFKLP17858 780 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 GJA8P48165 433 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 GIPRP48546 466 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 ZNF445P59923 1031 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 RACK1P63244 317 aaKnown RBP4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 GNL2Q13823 731 aaKnown RBP4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 TARBP2Q15633 366 aaKnown RBP4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 AXDND1Q5T1B0 1012 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 DCAF15Q66K64 600 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 POMZP3Q6PJE2 187 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 VPS37DQ86XT2 251 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 NT5DC4Q86YG4 428 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 NLGN1Q8N2Q7 840 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 C8orf37Q96NL8 207 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 HAUS7Q99871 368 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 SLC12A9Q9BXP2 914 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 NOL6Q9H6R4 1146 aaKnown RBP4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 TNFRSF12AQ9NP84 129 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 IMPACTQ9P2X3 320 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 FHOD3Q2V2M9 1422 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 FMN1Q68DA7 1419 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 CASKIN1Q8WXD9 1431 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 AQRO60306 1485 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 MRC2Q9UBG0 1479 aa4.87□□□□□ -1.63
HMGB3P11-201ENST00000440127 WDR97A6NE52 1622 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 ABCA5Q8WWZ7 1642 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 H0Y8X5 98 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 SHOXO15266 292 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 FGF10O15520 208 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 SRGAP3O43295 1099 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 CYBBP04839 570 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 VIPR1P32241 457 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 MAPKAPK2P49137 400 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 ZNF143P52747 638 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 GRB10Q13322 594 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 RTP2Q5QGT7 225 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 RCSD1Q6JBY9 416 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 ZC3H14Q6PJT7 736 aaKnown RBP4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 ZPBP2Q6X784 338 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 CCDC81Q6ZN84 652 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 LCNL1Q6ZST4 164 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 TMC6Q7Z403 805 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms