RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 WDR78Q5VTH9 848 aa16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 CAVIN1Q6NZI2 390 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 FAM160B2Q86V87 743 aa16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 TRIM22Q8IYM9 498 aa16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 UBA5Q9GZZ9 404 aa16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 SLC38A10Q9HBR0 1119 aa16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 RAVER2Q9HCJ3 691 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ZNF214Q9UL59 606 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 PTCH2Q9Y6C5 1203 aa16.77■□□□□ 0.28
TNFRSF1A-204ENST00000440083 ZBED4O75132 1171 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 DDAH1O94760 285 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ADD1P35611 737 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PPP2R5BQ15173 497 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CCDC174Q6PII3 467 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CPXCR1Q8N123 301 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 STAG2Q8N3U4 1231 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CHURC1Q8WUH1 139 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ALG1Q9BT22 464 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 SRRDQ9UH36 339 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PTPN22Q9Y2R2 807 aa16.76■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PLA2G6O60733 806 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PPFIA3O75145 1194 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PARP1P09874 1014 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 FDPSP14324 419 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ERCC3P19447 782 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CDC27P30260 824 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 UBE2HP62256 183 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CCNA1P78396 465 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GUCY1B3Q02153 619 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GRM4Q14833 912 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 SLC35G1Q2M3R5 365 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 L1TD1Q5T7N2 865 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 BTNL9Q6UXG8 535 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GPR142Q7Z601 462 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PLEKHH3Q7Z736 793 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 NCAPG2Q86XI2 1143 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 TNS4Q8IZW8 715 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GPT2Q8TD30 523 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ZNF396Q96N95 335 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 SLC26A6Q9BXS9 759 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 SCAND2PQ9GZW5 306 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 RBM28Q9NW13 759 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 RIPK3Q9Y572 518 aa16.75■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ZNF536O15090 1300 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 HTTP42858 3142 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 IFNAR1P17181 557 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 MAPK4P31152 587 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 STAT3P40763 770 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 FLT3LGP49771 235 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 AKAP17AQ02040 695 aaKnown RBP16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 TROAPQ12815 778 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ARHGEF6Q15052 776 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ASPRV1Q53RT3 343 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 FBXO46Q6PJ61 603 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 COA7Q96BR5 231 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 AGBL1Q96MI9 1066 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 MAD2L2Q9UI95 211 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GJD2Q9UKL4 321 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CFAP45Q9UL16 551 aa16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CTDP1Q9Y5B0 961 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GOLGA6L3A6NEY3 463 aa16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GNL2Q13823 731 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GPATCH4Q5T3I0 446 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 RIOX2Q8IUF8 465 aa16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 FANCBQ8NB91 859 aa16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CTCFLQ8NI51 663 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PHKBQ93100 1093 aa16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 SPATA32Q96LK8 384 aa16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 TEX13BQ9BXU2 312 aa16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 RANBP17Q9H2T7 1088 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 HOMER2Q9NSB8 354 aa16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 SMCHD1A6NHR9 2005 aa16.73■□□□□ 0.27
TNFRSF1A-204ENST00000440083 BAZ2BQ9UIF8 2168 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ELP1O95163 1332 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PALM3A6NDB9 673 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GNRH1P01148 92 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 HOXD10P28358 340 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 MORN1Q5T089 497 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ATL3Q6DD88 541 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 FAM173BQ6P4H8 233 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 NBPF11Q86T75 865 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ADGRF4Q8IZF3 695 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 SHCBP1Q8NEM2 672 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 FBXO18Q8NFZ0 1043 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 VAT1LQ9HCJ6 419 aa16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 FAM217BQ9NTX9 383 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 KLRF2D3W0D1 207 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ATP2A1O14983 1001 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 GADD45BO75293 160 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 ELNP15502 786 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 CYP2B6P20813 491 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PTPREP23469 700 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 NTRK3Q16288 839 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 PKN2Q16513 984 aaKnown RBP16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 BRAPQ7Z569 592 aa16.71■□□□□ 0.27
TNFRSF1A-204ENST00000440083 RAET1EQ8TD07 263 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms