RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 MICU3Q86XE3 530 aa12.18□□□□□ -0.46
UBE2F-213ENST00000439780 TRMT44Q8IYL2 757 aaKnown RBP12.18□□□□□ -0.46
UBE2F-213ENST00000439780 ANKRD35Q8N283 1001 aa12.18□□□□□ -0.46
UBE2F-213ENST00000439780 FBXL16Q8N461 479 aa12.18□□□□□ -0.46
UBE2F-213ENST00000439780 FANCBQ8NB91 859 aa12.18□□□□□ -0.46
UBE2F-213ENST00000439780 TRPV1Q8NER1 839 aa12.18□□□□□ -0.46
UBE2F-213ENST00000439780 CTCFLQ8NI51 663 aaPredicted RBP12.18□□□□□ -0.46
UBE2F-213ENST00000439780 PIBF1Q8WXW3 757 aa12.18□□□□□ -0.46
UBE2F-213ENST00000439780 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
UBE2F-213ENST00000439780 BRF1Q92994 677 aa12.18□□□□□ -0.46
UBE2F-213ENST00000439780 DDX11Q96FC9 970 aa12.18□□□□□ -0.46
UBE2F-213ENST00000439780 PURBQ96QR8 312 aaKnown RBP12.18□□□□□ -0.46
UBE2F-213ENST00000439780 FAM217BQ9NTX9 383 aaPredicted RBP12.18□□□□□ -0.46
UBE2F-213ENST00000439780 BAZ2BQ9UIF8 2168 aaKnown RBP12.18□□□□□ -0.46
UBE2F-213ENST00000439780 ASTN1O14525 1302 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 SOWAHBA6NEL2 793 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 ZBTB5O15062 677 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 CALM1P0DP23 149 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 CALM2P0DP24 149 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 CALM3P0DP25 149 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
UBE2F-213ENST00000439780 EN2P19622 333 aaPredicted RBP12.17□□□□□ -0.46
UBE2F-213ENST00000439780 CDC27P30260 824 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 CCND3P30281 292 aaPredicted RBP12.17□□□□□ -0.46
UBE2F-213ENST00000439780 BAATQ14032 418 aaPredicted RBP12.17□□□□□ -0.46
UBE2F-213ENST00000439780 TOB2Q14106 344 aaPredicted RBP12.17□□□□□ -0.46
UBE2F-213ENST00000439780 PRAMEF19Q5SWL8 479 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 NSMFQ6X4W1 530 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 HOMER1Q86YM7 354 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 FAM133AQ8N9E0 248 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 IL17RAQ96F46 866 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 LARP6Q9BRS8 491 aaKnown RBP12.17□□□□□ -0.46
UBE2F-213ENST00000439780 RNF208Q9H0X6 261 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 CYP39A1Q9NYL5 469 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 DIS3Q9Y2L1 958 aaKnown RBP12.17□□□□□ -0.46
UBE2F-213ENST00000439780 CYP46A1Q9Y6A2 500 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 DDX49Q9Y6V7 483 aaKnown RBP12.17□□□□□ -0.46
UBE2F-213ENST00000439780 BRCA2P51587 3418 aa12.17□□□□□ -0.46
UBE2F-213ENST00000439780 OPLAHO14841 1288 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 ZBTB43O43298 467 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 SMARCA1P28370 1054 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 KIF5BP33176 963 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 ANAPC15P60006 121 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 FGD1P98174 961 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 FUT2Q10981 343 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 MFSD14CQ5VZR4 134 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 SLC30A10Q6XR72 485 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 TMTC3Q6ZXV5 915 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 TINF2Q9BSI4 451 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 SPZ1Q9BXG8 430 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.16□□□□□ -0.46
UBE2F-213ENST00000439780 PAK6Q9NQU5 681 aaPredicted RBP12.16□□□□□ -0.46
UBE2F-213ENST00000439780 SLC5A4Q9NY91 659 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 PLXNA1Q9UIW2 1896 aa12.16□□□□□ -0.46
UBE2F-213ENST00000439780 KIAA0100Q14667 2235 aaKnown RBP12.15□□□□□ -0.46
UBE2F-213ENST00000439780 ABCB11O95342 1321 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 RPTORQ8N122 1335 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 PNMA6FA0A0J9YX94 578 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 GOLGA8AA7E2F4 631 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 GOLGA8BA8MQT2 603 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 SNAI1O95863 264 aaPredicted RBP12.15□□□□□ -0.46
UBE2F-213ENST00000439780 GJB1P08034 283 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 CYBAP13498 195 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 ADD1P35611 737 aaKnown RBP12.15□□□□□ -0.46
UBE2F-213ENST00000439780 GNAQP50148 359 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 EVCP57679 992 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 MAMDC4Q6UXC1 1216 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 SYNE3Q6ZMZ3 975 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 SHISA4Q96DD7 197 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 DEFB118Q96PH6 123 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 LZTS2Q9BRK4 669 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 HMX1Q9NP08 348 aaPredicted RBP12.15□□□□□ -0.46
UBE2F-213ENST00000439780 PDRG1Q9NUG6 133 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 PNMA2Q9UL42 364 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.46
UBE2F-213ENST00000439780 LCTP09848 1927 aa12.15□□□□□ -0.46
UBE2F-213ENST00000439780 PFASO15067 1338 aa12.14□□□□□ -0.47
UBE2F-213ENST00000439780 PTPDC1A2A3K4 754 aa12.14□□□□□ -0.47
UBE2F-213ENST00000439780 PDIA3P30101 505 aaKnown RBP12.14□□□□□ -0.47
UBE2F-213ENST00000439780 RPS6P62753 249 aaKnown RBP12.14□□□□□ -0.47
UBE2F-213ENST00000439780 RTN1Q16799 776 aa12.14□□□□□ -0.47
UBE2F-213ENST00000439780 RNF207Q6ZRF8 634 aa12.14□□□□□ -0.47
UBE2F-213ENST00000439780 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
UBE2F-213ENST00000439780 RGS22Q8NE09 1264 aa12.14□□□□□ -0.47
UBE2F-213ENST00000439780 U2AF1L4Q8WU68 220 aaKnown RBP12.14□□□□□ -0.47
UBE2F-213ENST00000439780 KIF2CQ99661 725 aa12.14□□□□□ -0.47
UBE2F-213ENST00000439780 COL20A1Q9P218 1284 aa12.14□□□□□ -0.47
UBE2F-213ENST00000439780 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
UBE2F-213ENST00000439780 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 MYH6P13533 1939 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 RBBP6Q7Z6E9 1792 aaKnown RBP12.13□□□□□ -0.47
UBE2F-213ENST00000439780 EIF5BO60841 1220 aaKnown RBP12.13□□□□□ -0.47
UBE2F-213ENST00000439780 SGPL1O95470 568 aa12.13□□□□□ -0.47
UBE2F-213ENST00000439780 ZNF865P0CJ78 1059 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms