RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 FOXP4Q8IVH2 680 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-205ENST00000439160 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 NSUN4Q96CB9 384 aaKnown RBP13.63□□□□□ -0.23
TCOF1-205ENST00000439160 CEP95Q96GE4 821 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 TSGA10Q9BZW7 698 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 MROH7-TTC4A0A0A0MT08 1334 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 XRCC5P13010 732 aaKnown RBP13.63□□□□□ -0.23
TCOF1-205ENST00000439160 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.23
TCOF1-205ENST00000439160 ARHGAP44Q17R89 818 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 XKR9Q5GH70 373 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 GJA10Q969M2 543 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 ERO1AQ96HE7 468 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 CEP83Q9Y592 693 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 LAD1O00515 517 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 HSF2BPO75031 334 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 DALRD3Q5D0E6 543 aaKnown RBP13.63□□□□□ -0.23
TCOF1-205ENST00000439160 LRCH2Q5VUJ6 765 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 DHX37Q8IY37 1157 aaKnown RBP13.63□□□□□ -0.23
TCOF1-205ENST00000439160 TMEM87AQ8NBN3 555 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 FAM107BQ9H098 131 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 ARMCX3Q9UH62 379 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-205ENST00000439160 ITSN1Q15811 1721 aa13.63□□□□□ -0.23
TCOF1-205ENST00000439160 A0A0G2JLW4 131 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 STAT2P52630 851 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 EXOSC10Q01780 885 aaKnown RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 EN1Q05925 392 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 SMC1AQ14683 1233 aaKnown RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 LRRC41Q15345 812 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 FAM102BQ5T8I3 360 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 CIAPIN1Q6FI81 312 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 RTKN2Q8IZC4 609 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 MYRIPQ8NFW9 859 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 ZFP91Q96JP5 570 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 PYCARDQ9ULZ3 195 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 ECE2O60344 883 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 DNM2P50570 870 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 GOLGA8FQ08AF8 430 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 GOLGA8DPQ0D2H9 430 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 RC3H1Q5TC82 1133 aaKnown RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 BARGINQ6ZT62 677 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 MCF2L2Q86YR7 1114 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 SECISBP2LQ93073 1101 aaKnown RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 DCPSQ96C86 337 aaKnown RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 MAN1B1Q9UKM7 699 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 MST1RQ04912 1400 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 HOXA13P31271 388 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 CDC37Q16543 378 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 TEKT3Q9BXF9 490 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 UBN2Q6ZU65 1347 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 SFMBT2Q5VUG0 894 aa13.62□□□□□ -0.23
TCOF1-205ENST00000439160 LARSQ9P2J5 1176 aaKnown RBP13.62□□□□□ -0.23
TCOF1-205ENST00000439160 MEIS1O00470 390 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 CHRNA5P30532 468 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 ADAM9Q13443 819 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 AK8Q96MA6 479 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 COL4A3BPQ9Y5P4 624 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 PXDNQ92626 1479 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 PNPLA7Q6ZV29 1317 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 SPOPO43791 374 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
TCOF1-205ENST00000439160 SYDE2Q5VT97 1194 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 NCAPG2Q86XI2 1143 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 FMNL3Q8IVF7 1028 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 LSM14BQ9BX40 385 aaKnown RBP13.61□□□□□ -0.23
TCOF1-205ENST00000439160 IFIH1Q9BYX4 1025 aaKnown RBP13.61□□□□□ -0.23
TCOF1-205ENST00000439160 RABGAP1Q9Y3P9 1069 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 WDR19Q8NEZ3 1342 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 SEPT2Q15019 361 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 ELF2Q15723 593 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 MLXIPQ9HAP2 919 aa13.61□□□□□ -0.23
TCOF1-205ENST00000439160 SAMSN1Q9NSI8 373 aaKnown RBP13.61□□□□□ -0.23
TCOF1-205ENST00000439160 ZNF500O60304 480 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-205ENST00000439160 VAV2P52735 878 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 GSTA5Q7RTV2 222 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 TBC1D16Q8TBP0 767 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 NOX5Q96PH1 765 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 PTPREP23469 700 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 CASP1P29466 404 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 TRPC3Q13507 836 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 TBC1D10BQ4KMP7 808 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-205ENST00000439160 INTS5Q6P9B9 1019 aaKnown RBP13.6□□□□□ -0.23
TCOF1-205ENST00000439160 OTUD6AQ7L8S5 288 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 ZNF277Q9NRM2 450 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-205ENST00000439160 K7ENM7 598 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 ATP1A3P13637 1013 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 PLCG1P19174 1290 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 COPB1P53618 953 aaKnown RBP13.6□□□□□ -0.23
TCOF1-205ENST00000439160 PFKFB3Q16875 520 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-205ENST00000439160 ODR4Q5SWX8 454 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 TMEM179Q6ZVK1 233 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 CACTINQ8WUQ7 758 aaKnown RBP13.6□□□□□ -0.23
TCOF1-205ENST00000439160 KIFAP3Q92845 792 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 TUBGCP2Q9BSJ2 902 aa13.6□□□□□ -0.23
TCOF1-205ENST00000439160 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms