RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 DCP1AQ9NPI6 582 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-208ENST00000439029 LMCD1Q9NZU5 365 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 SWAP70Q9UH65 585 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 MUTYHQ9UIF7 546 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 CTDP1Q9Y5B0 961 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-208ENST00000439029 ZFHX2Q9C0A1 2572 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-208ENST00000439029 SPTBN4Q9H254 2564 aa11.77□□□□□ -0.53
SMPD4-208ENST00000439029 MYO7AQ13402 2215 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 MYH8P13535 1937 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 PTPRSQ13332 1948 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 SOWAHBA6NEL2 793 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 GFRA3O60609 400 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 MYL3P08590 195 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 IQCF3P0C7M6 154 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 CDK8P49336 464 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 ZP2Q05996 745 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 FBXO16Q8IX29 292 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-208ENST00000439029 RETREG2Q8NC44 543 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMPD4-208ENST00000439029 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
SMPD4-208ENST00000439029 ZBED4O75132 1171 aa11.75□□□□□ -0.53
SMPD4-208ENST00000439029 SUPT20HL2P0C7V6 817 aa11.75□□□□□ -0.53
SMPD4-208ENST00000439029 IRS1P35568 1242 aa11.75□□□□□ -0.53
SMPD4-208ENST00000439029 CHMP4BP1P59074 171 aa11.75□□□□□ -0.53
SMPD4-208ENST00000439029 WDR5P61964 334 aaKnown RBP11.75□□□□□ -0.53
SMPD4-208ENST00000439029 SLFNL1Q499Z3 407 aa11.75□□□□□ -0.53
SMPD4-208ENST00000439029 TGS1Q96RS0 853 aaKnown RBP11.75□□□□□ -0.53
SMPD4-208ENST00000439029 CRBNQ96SW2 442 aa11.75□□□□□ -0.53
SMPD4-208ENST00000439029 ARMT1Q9H993 441 aa11.75□□□□□ -0.53
SMPD4-208ENST00000439029 KANSL2Q9H9L4 492 aa11.75□□□□□ -0.53
SMPD4-208ENST00000439029 LINC01553A4QN01 128 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
SMPD4-208ENST00000439029 BCAR3O75815 825 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 GNAI2P04899 355 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 PDE6AP16499 860 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 RFC2P35250 354 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 PTPN5P54829 565 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 ERVK-21P61565 698 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 TCF15Q12870 199 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 CLUL1Q15846 466 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 TCTN1Q2MV58 587 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 CHMP4CQ96CF2 233 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 EAF2Q96CJ1 260 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-208ENST00000439029 CCDC17Q96LX7 622 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 C17orf80Q9BSJ5 609 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 TNNQ9UQP3 1299 aa11.74□□□□□ -0.53
SMPD4-208ENST00000439029 TRIP12Q14669 1992 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-208ENST00000439029 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 E9PSI1 815 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 IGSF3O75054 1194 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 NDUFB10O96000 172 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 NBPF20Q3BBV1 942 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 SLC9C2Q5TAH2 1124 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 TAPT1Q6NXT6 567 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 KIAA1211Q6ZU35 1233 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 FAM133AQ8N9E0 248 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 PRPF38AQ8NAV1 312 aaKnown RBP11.73□□□□□ -0.53
SMPD4-208ENST00000439029 PURBQ96QR8 312 aaKnown RBP11.73□□□□□ -0.53
SMPD4-208ENST00000439029 SEZ6LQ9BYH1 1024 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
SMPD4-208ENST00000439029 BAZ2AQ9UIF9 1905 aaKnown RBP11.73□□□□□ -0.53
SMPD4-208ENST00000439029 CFAP54Q96N23 3096 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 USP17L12C9JPN9 530 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 USP17L21D6R901 530 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 F5H6K3 240 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 BAIAP3O94812 1187 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 PURAQ00577 322 aaKnown RBP11.72□□□□□ -0.53
SMPD4-208ENST00000439029 FOXK2Q01167 660 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 KLRC3Q07444 240 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 SLFN5Q08AF3 891 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 PUS10Q3MIT2 529 aaKnown RBP11.72□□□□□ -0.53
SMPD4-208ENST00000439029 ADHFE1Q8IWW8 467 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 CHST13Q8NET6 341 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMPD4-208ENST00000439029 A1CFQ9NQ94 594 aaKnown RBP11.72□□□□□ -0.53
SMPD4-208ENST00000439029 FBXO40Q9UH90 709 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 ISY1Q9ULR0 285 aaKnown RBP11.72□□□□□ -0.53
SMPD4-208ENST00000439029 COG6Q9Y2V7 657 aa11.72□□□□□ -0.53
SMPD4-208ENST00000439029 USP34Q70CQ2 3546 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 ASB14A6NK59 587 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 ATP2A1O14983 1001 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 GJB5O95377 273 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 GPNMBQ14956 572 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 TCEAL5Q5H9L2 206 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 C12orf60Q5U649 245 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 IQSEC1Q6DN90 963 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 RNF135Q8IUD6 432 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 RAD9AQ99638 391 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 MTG1Q9BT17 334 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-208ENST00000439029 UPF3BQ9BZI7 483 aaKnown RBP11.71□□□□□ -0.53
SMPD4-208ENST00000439029 BCL11AQ9H165 835 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 C1orf115Q9H7X2 142 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 SLC38A10Q9HBR0 1119 aa11.71□□□□□ -0.53
SMPD4-208ENST00000439029 GPHNQ9NQX3 736 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms