RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 RRP12Q5JTH9 1297 aaKnown RBP8.88□□□□□ -0.99
HMGB2-202ENST00000438704 FKBP1CQ5VVH2 108 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 RCSD1Q6JBY9 416 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 NFXL1Q6ZNB6 911 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 CDC37L1Q7L3B6 337 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 MAPKAPK5Q8IW41 473 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 ZNF654Q8IZM8 581 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 FAM184AQ8NB25 1140 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 FANCBQ8NB91 859 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 FBXO18Q8NFZ0 1043 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 NEDD1Q8NHV4 660 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 WASF1Q92558 559 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 OSBPL5Q9H0X9 879 aaPredicted RBP8.88□□□□□ -0.99
HMGB2-202ENST00000438704 DHX36Q9H2U1 1008 aaKnown RBP8.88□□□□□ -0.99
HMGB2-202ENST00000438704 RBM28Q9NW13 759 aaKnown RBP8.88□□□□□ -0.99
HMGB2-202ENST00000438704 ORC3Q9UBD5 711 aaPredicted RBP8.88□□□□□ -0.99
HMGB2-202ENST00000438704 SWAP70Q9UH65 585 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 ZNRF3Q9ULT6 936 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 COL4A5P29400 1685 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 MYH1P12882 1939 aa8.88□□□□□ -0.99
HMGB2-202ENST00000438704 ECM29Q5VYK3 1845 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 MEN1O00255 615 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 RANBP6O60518 1105 aaKnown RBP8.87□□□□□ -0.99
HMGB2-202ENST00000438704 ENTPD3O75355 529 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 MBD3O95983 291 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 POLR3DP05423 398 aaPredicted RBP8.87□□□□□ -0.99
HMGB2-202ENST00000438704 CDC27P30260 824 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 IARSP41252 1262 aaKnown RBP8.87□□□□□ -0.99
HMGB2-202ENST00000438704 CDK8P49336 464 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 CLN3Q13286 438 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 RTN1Q16799 776 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 IFIT1BQ5T764 474 aaKnown RBP8.87□□□□□ -0.99
HMGB2-202ENST00000438704 MCTP1Q6DN14 999 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 CATIPQ7Z7H3 387 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 NBPF11Q86T75 865 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 MICU3Q86XE3 530 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 LARGE2Q8N3Y3 721 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 ZBED3Q96IU2 234 aaPredicted RBP8.87□□□□□ -0.99
HMGB2-202ENST00000438704 RNF26Q9BY78 433 aaPredicted RBP8.87□□□□□ -0.99
HMGB2-202ENST00000438704 TAOK3Q9H2K8 898 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 DDX4Q9NQI0 724 aaKnown RBP8.87□□□□□ -0.99
HMGB2-202ENST00000438704 KCNQ5Q9NR82 932 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 TOMM22Q9NS69 142 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 USP40Q9NVE5 1235 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 ISY1Q9ULR0 285 aaKnown RBP8.87□□□□□ -0.99
HMGB2-202ENST00000438704 ARFGEF1Q9Y6D6 1849 aa8.87□□□□□ -0.99
HMGB2-202ENST00000438704 IGKV6D-41A0A0C4DH26 115 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 VPS37CA5D8V6 355 aaPredicted RBP8.86□□□□□ -0.99
HMGB2-202ENST00000438704 TSPY2A6NKD2 308 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 SPATA31C2B4DYI2 1134 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 NFKBIEO00221 500 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 PRDM1O75626 825 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 RPS12P25398 132 aaKnown RBP8.86□□□□□ -0.99
HMGB2-202ENST00000438704 SMARCA1P28370 1054 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 KRT85P78386 507 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 TFAP4Q01664 338 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 BRAPQ7Z569 592 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 NIM1KQ8IY84 436 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 ZNF444Q8N0Y2 327 aaPredicted RBP8.86□□□□□ -0.99
HMGB2-202ENST00000438704 CRACR2BQ8N4Y2 399 aaPredicted RBP8.86□□□□□ -0.99
HMGB2-202ENST00000438704 DDX11Q96FC9 970 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 CCDC17Q96LX7 622 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 MXD3Q9BW11 206 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 SCAND2PQ9GZW5 306 aaPredicted RBP8.86□□□□□ -0.99
HMGB2-202ENST00000438704 MKNK2Q9HBH9 465 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 IL17RBQ9NRM6 502 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 SERPINB13Q9UIV8 391 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 TCHHQ07283 1943 aa8.86□□□□□ -0.99
HMGB2-202ENST00000438704 GREB1LQ9C091 1923 aaPredicted RBP8.86□□□□□ -0.99
HMGB2-202ENST00000438704 H3BQV1 296 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 PSMD14O00487 310 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 PRPF3O43395 683 aaKnown RBP8.85□□□□□ -0.99
HMGB2-202ENST00000438704 DEXIO95424 95 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 HLA-DOAP06340 250 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 GNAQP50148 359 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 SCNN1DP51172 638 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 SSRP1Q08945 709 aaKnown RBP8.85□□□□□ -0.99
HMGB2-202ENST00000438704 DBN1Q16643 649 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 TMTC3Q6ZXV5 915 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 KIAA0825Q8IV33 1275 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 FOXP4Q8IVH2 680 aaPredicted RBP8.85□□□□□ -0.99
HMGB2-202ENST00000438704 BANK1Q8NDB2 785 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 DYNLL2Q96FJ2 89 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 C8orf76Q96K31 380 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 LZTS2Q9BRK4 669 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 GRIP2Q9C0E4 1043 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 ZNF277Q9NRM2 450 aaPredicted RBP8.85□□□□□ -0.99
HMGB2-202ENST00000438704 PI4KBQ9UBF8 816 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 HDAC9Q9UKV0 1011 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 SYNPO2Q9UMS6 1093 aa8.85□□□□□ -0.99
HMGB2-202ENST00000438704 MORC2Q9Y6X9 1032 aaPredicted RBP8.85□□□□□ -0.99
HMGB2-202ENST00000438704 F8W031 263 aaPredicted RBP8.84□□□□□ -0.99
HMGB2-202ENST00000438704 PRPF40AO75400 957 aaKnown RBP8.84□□□□□ -0.99
HMGB2-202ENST00000438704 TSPY3P0CV98 308 aa8.84□□□□□ -0.99
HMGB2-202ENST00000438704 TSPY8P0CW00 308 aa8.84□□□□□ -0.99
HMGB2-202ENST00000438704 U2AF2P26368 475 aaKnown RBP eCLIP8.84□□□□□ -0.994e-7■■□□□ 13.5
HMGB2-202ENST00000438704 KIF5BP33176 963 aa8.84□□□□□ -0.99
HMGB2-202ENST00000438704 ZNF280AP59817 542 aaPredicted RBP8.84□□□□□ -0.99
HMGB2-202ENST00000438704 UBE2HP62256 183 aa8.84□□□□□ -0.99
HMGB2-202ENST00000438704 DNM1Q05193 864 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms