RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 TMX2Q9Y320 296 aa14.97□□□□□ -0.01
SMAD9-IT1-201ENST00000437983 C5orf42Q9H799 3197 aa14.96□□□□□ -0.01
SMAD9-IT1-201ENST00000437983 TTLL13PA6NNM8 815 aa14.96□□□□□ -0.01
SMAD9-IT1-201ENST00000437983 KIF28PB7ZC32 967 aa14.96□□□□□ -0.01
SMAD9-IT1-201ENST00000437983 WDR46O15213 610 aaKnown RBP14.96□□□□□ -0.01
SMAD9-IT1-201ENST00000437983 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
SMAD9-IT1-201ENST00000437983 ZMYND10O75800 440 aa14.96□□□□□ -0.01
SMAD9-IT1-201ENST00000437983 PTPN5P54829 565 aa14.96□□□□□ -0.01
SMAD9-IT1-201ENST00000437983 ZP2Q05996 745 aa14.96□□□□□ -0.01
SMAD9-IT1-201ENST00000437983 CABYRO75952 493 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 POLR3DP05423 398 aaPredicted RBP14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 ACTN1P12814 892 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 SLC4A3P48751 1232 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TTC39AQ5SRH9 613 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 NOL8Q76FK4 1167 aaKnown RBP14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 ARMCX2Q7L311 632 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 NEK9Q8TD19 979 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 MEIS3Q99687 375 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 PPP1R9AQ9ULJ8 1098 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 MYO15AQ9UKN7 3530 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TECTAO75443 2155 aa14.95□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 PTPRZ1P23471 2315 aaPredicted RBP14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 PTPRSQ13332 1948 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 CYP2D6P10635 497 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 AKR1B1P15121 316 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 IRS1P35568 1242 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TNFAIP2Q03169 654 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 FSCN1Q16658 493 aaKnown RBP14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TMEM63BQ5T3F8 832 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 SNRNP48Q6IEG0 339 aaKnown RBP14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TMEM179Q6ZVK1 233 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 CCDC144CPQ8IYA2 1237 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 DBNDD2Q9BQY9 259 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 MUTYHQ9UIF7 546 aa14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 GNEQ9Y223 722 aaKnown RBP14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 DDX49Q9Y6V7 483 aaKnown RBP14.94□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 COPB2P35606 906 aa14.93□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 ICA1Q05084 483 aa14.93□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TLK2Q86UE8 772 aa14.93□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 MAGEB6Q8N7X4 407 aa14.93□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 PPP1R13LQ8WUF5 828 aa14.93□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 FTOQ9C0B1 505 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 ARHGEF10LQ9HCE6 1279 aa14.93□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TET1Q8NFU7 2136 aa14.93□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 DYNC1LI2O43237 492 aaPredicted RBP14.92□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 IDH1O75874 414 aaKnown RBP14.92□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 PPP1R15BQ5SWA1 713 aa14.92□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 FAM83BQ5T0W9 1011 aa14.92□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 DYNLL2Q96FJ2 89 aa14.92□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TEX13BQ9BXU2 312 aa14.92□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 ALG13Q9NP73 1137 aaKnown RBP14.92□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 GPHNQ9NQX3 736 aaPredicted RBP14.92□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TNKSO95271 1327 aa14.92□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 DCHS1Q96JQ0 3298 aa14.91□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 IQCF3P0C7M6 154 aa14.91□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 SMPD1P17405 629 aa14.91□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 ERVK-21P61565 698 aa14.91□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 CNTN2Q02246 1040 aa14.91□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 PUS10Q3MIT2 529 aaKnown RBP14.91□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 MCM9Q9NXL9 1143 aa14.91□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 CACNA1HO95180 2353 aa14.91□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 DMDP11532 3685 aa14.91□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 RAD21O60216 631 aa14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 EEF2P13639 858 aaKnown RBP14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 DEFB103AP81534 67 aa14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 CCDC158Q5M9N0 1113 aa14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 ADHFE1Q8IWW8 467 aa14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 CPXCR1Q8N123 301 aa14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 TGS1Q96RS0 853 aaKnown RBP14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 NUP88Q99567 741 aaPredicted RBP14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 RIOK1Q9BRS2 568 aaKnown RBP14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 ZBED2Q9BTP6 218 aa14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 SEZ6LQ9BYH1 1024 aa14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 AP5M1Q9H0R1 490 aa14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 PDGFCQ9NRA1 345 aa14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 BMP2KQ9NSY1 1161 aaPredicted RBP14.9□□□□□ -0.02
SMAD9-IT1-201ENST00000437983 LINC01553A4QN01 128 aa14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 RFC2P35250 354 aa14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 WDR5P61964 334 aaKnown RBP14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 MTX1Q13505 466 aa14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 HERC4Q5GLZ8 1057 aaPredicted RBP14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 ANKRD35Q8N283 1001 aa14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 ANTXR1Q9H6X2 564 aa14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 SH2D4AQ9H788 454 aa14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 PRKAG3Q9UGI9 489 aa14.89□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 ZEB2O60315 1214 aa14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 SUPT20HL2P0C7V6 817 aa14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 MLLT3P42568 568 aaPredicted RBP14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 KCNJ6P48051 423 aa14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 G3BP1Q13283 466 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 TNNI3KQ59H18 835 aa14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 CERS3Q8IU89 383 aa14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 RNF135Q8IUD6 432 aa14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 PBXIP1Q96AQ6 731 aa14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 UPF3BQ9BZI7 483 aaKnown RBP14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 RAVER2Q9HCJ3 691 aaKnown RBP14.88□□□□□ -0.03
SMAD9-IT1-201ENST00000437983 FPGT-TNNI3KV9GXZ4 949 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms