RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 TAPT1Q6NXT6 567 aa16.14■□□□□ 0.17
PTPN7-203ENST00000435759 EEPD1Q7L9B9 569 aa16.14■□□□□ 0.17
PTPN7-203ENST00000435759 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
PTPN7-203ENST00000435759 CYP39A1Q9NYL5 469 aa16.14■□□□□ 0.17
PTPN7-203ENST00000435759 GNEQ9Y223 722 aaKnown RBP16.14■□□□□ 0.17
PTPN7-203ENST00000435759 VCANP13611 3396 aa16.13■□□□□ 0.17
PTPN7-203ENST00000435759 DYNC1LI2O43237 492 aaPredicted RBP16.13■□□□□ 0.17
PTPN7-203ENST00000435759 TIMP1P01033 207 aa16.13■□□□□ 0.17
PTPN7-203ENST00000435759 SMPD1P17405 629 aa16.13■□□□□ 0.17
PTPN7-203ENST00000435759 SMAD3P84022 425 aaKnown RBP16.13■□□□□ 0.17
PTPN7-203ENST00000435759 TKFCQ3LXA3 575 aa16.13■□□□□ 0.17
PTPN7-203ENST00000435759 ZNF697Q5TEC3 545 aa16.13■□□□□ 0.17
PTPN7-203ENST00000435759 NOL8Q76FK4 1167 aaKnown RBP16.13■□□□□ 0.17
PTPN7-203ENST00000435759 GLT1D1Q96MS3 346 aa16.13■□□□□ 0.17
PTPN7-203ENST00000435759 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
PTPN7-203ENST00000435759 TBX21Q9UL17 535 aa16.13■□□□□ 0.17
PTPN7-203ENST00000435759 ELP1O95163 1332 aa16.13■□□□□ 0.17
PTPN7-203ENST00000435759 FRMPD2Q68DX3 1309 aaPredicted RBP16.13■□□□□ 0.17
PTPN7-203ENST00000435759 ARVCFO00192 962 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 NKX3-2P78367 333 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 FPGSQ05932 587 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 BAATQ14032 418 aaPredicted RBP16.12■□□□□ 0.17
PTPN7-203ENST00000435759 CCDC96Q2M329 555 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 CXCL17Q6UXB2 119 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 NSMFQ6X4W1 530 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 PCSK9Q8NBP7 692 aaKnown RBP16.12■□□□□ 0.17
PTPN7-203ENST00000435759 RILPL2Q969X0 211 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 RNPC3Q96LT9 517 aaKnown RBP16.12■□□□□ 0.17
PTPN7-203ENST00000435759 SPC25Q9HBM1 224 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 CCPG1Q9ULG6 757 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 GRIN2DO15399 1336 aa16.12■□□□□ 0.17
PTPN7-203ENST00000435759 LTBP2Q14767 1821 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 ASB14A6NK59 587 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 ICAM1P05362 532 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
PTPN7-203ENST00000435759 PPP4R3BQ5MIZ7 849 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 BTNL9Q6UXG8 535 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 FBXO16Q8IX29 292 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-203ENST00000435759 DCAF4Q8WV16 495 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 MYLIPQ8WY64 445 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.11■□□□□ 0.17
PTPN7-203ENST00000435759 RANBP17Q9H2T7 1088 aaKnown RBP16.11■□□□□ 0.17
PTPN7-203ENST00000435759 TCP11L1Q9NUJ3 509 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 PLXNA1Q9UIW2 1896 aa16.11■□□□□ 0.17
PTPN7-203ENST00000435759 NFIBO00712 420 aa16.1■□□□□ 0.17
PTPN7-203ENST00000435759 ACRP10323 421 aa16.1■□□□□ 0.17
PTPN7-203ENST00000435759 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
PTPN7-203ENST00000435759 MFSD5Q6N075 450 aa16.1■□□□□ 0.17
PTPN7-203ENST00000435759 TBC1D10CQ8IV04 446 aa16.1■□□□□ 0.17
PTPN7-203ENST00000435759 PLEKHM2Q8IWE5 1019 aa16.1■□□□□ 0.17
PTPN7-203ENST00000435759 FAM126BQ8IXS8 530 aa16.1■□□□□ 0.17
PTPN7-203ENST00000435759 CLEC4DQ8WXI8 215 aa16.1■□□□□ 0.17
PTPN7-203ENST00000435759 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
PTPN7-203ENST00000435759 MYH4Q9Y623 1939 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 CUL9Q8IWT3 2517 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 A0A0U1RQG5 324 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-203ENST00000435759 GRXCR1A8MXD5 290 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 CD4P01730 458 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 CSF2RAP15509 400 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 SDSP20132 328 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 CYP2C18P33260 490 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 PSMC6P62333 389 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 FSCN1Q16658 493 aaKnown RBP16.09■□□□□ 0.17
PTPN7-203ENST00000435759 TMEM240Q5SV17 173 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 IQSEC1Q6DN90 963 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 KIAA1211Q6ZU35 1233 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 TLK2Q86UE8 772 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 SLC43A3Q8NBI5 491 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 ZKSCAN3Q9BRR0 538 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 PPP1R12CQ9BZL4 782 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 TRPV6Q9H1D0 765 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 CPVLQ9H3G5 476 aa16.09■□□□□ 0.17
PTPN7-203ENST00000435759 PDHBP11177 359 aa16.08■□□□□ 0.16
PTPN7-203ENST00000435759 GRIN2CQ14957 1233 aa16.08■□□□□ 0.16
PTPN7-203ENST00000435759 AKNAD1Q5T1N1 836 aa16.08■□□□□ 0.16
PTPN7-203ENST00000435759 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
PTPN7-203ENST00000435759 EXOC6Q8TAG9 804 aa16.08■□□□□ 0.16
PTPN7-203ENST00000435759 MORC4Q8TE76 937 aa16.08■□□□□ 0.16
PTPN7-203ENST00000435759 AP5M1Q9H0R1 490 aa16.08■□□□□ 0.16
PTPN7-203ENST00000435759 UMODL1Q5DID0 1318 aa16.08■□□□□ 0.16
PTPN7-203ENST00000435759 SPTBN5Q9NRC6 3674 aaKnown RBP16.08■□□□□ 0.16
PTPN7-203ENST00000435759 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-203ENST00000435759 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-203ENST00000435759 GOLGA8HP0CJ92 632 aa16.07■□□□□ 0.16
PTPN7-203ENST00000435759 PBX2P40425 430 aa16.07■□□□□ 0.16
PTPN7-203ENST00000435759 ITGA7Q13683 1181 aa16.07■□□□□ 0.16
PTPN7-203ENST00000435759 ZNF365Q70YC5 407 aa16.07■□□□□ 0.16
PTPN7-203ENST00000435759 CHD1LQ86WJ1 897 aa16.07■□□□□ 0.16
PTPN7-203ENST00000435759 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTPN7-203ENST00000435759 TBC1D5Q92609 795 aa16.07■□□□□ 0.16
PTPN7-203ENST00000435759 COL25A1Q9BXS0 654 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-203ENST00000435759 UBA5Q9GZZ9 404 aa16.07■□□□□ 0.16
PTPN7-203ENST00000435759 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
PTPN7-203ENST00000435759 CCDC171Q6TFL3 1326 aa16.07■□□□□ 0.16
PTPN7-203ENST00000435759 CALML3P27482 149 aa16.06■□□□□ 0.16
PTPN7-203ENST00000435759 ALDH5A1P51649 535 aaPredicted RBP16.06■□□□□ 0.16
PTPN7-203ENST00000435759 NUCB1Q02818 461 aa16.06■□□□□ 0.16
PTPN7-203ENST00000435759 ZNF543Q08ER8 600 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms