RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 HOMER2Q9NSB8 354 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 PCDHA12Q9UN75 941 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 MYH2Q9UKX2 1941 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 TAL1P17542 331 aaPredicted RBP13.65□□□□□ -0.22
CLDN4-203ENST00000435050 MCM6Q14566 821 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 NCAPHQ15003 741 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 FKBP15Q5T1M5 1219 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 CCDC84Q86UT8 332 aaPredicted RBP13.65□□□□□ -0.22
CLDN4-203ENST00000435050 NELFCDQ8IXH7 590 aa13.65□□□□□ -0.22
CLDN4-203ENST00000435050 SPZ1Q9BXG8 430 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 KCNJ18B7U540 433 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 CASQ1P31415 396 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 PRKG1Q13976 671 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 KCNJ12Q14500 433 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 LRRC41Q15345 812 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 SLC15A2Q16348 729 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
CLDN4-203ENST00000435050 ARL6IP4Q66PJ3 421 aaKnown RBP13.64□□□□□ -0.23
CLDN4-203ENST00000435050 POLD4Q9HCU8 107 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 ERCC5P28715 1186 aaPredicted RBP13.64□□□□□ -0.23
CLDN4-203ENST00000435050 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 KIF4BQ2VIQ3 1234 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 KMT5BQ4FZB7 885 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 PPP4R3BQ5MIZ7 849 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 KIAA1328Q86T90 577 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 VSTM4Q8IW00 320 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 BPIFA3Q9BQP9 254 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 MMRN2Q9H8L6 949 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 KIF2AO00139 706 aaPredicted RBP13.64□□□□□ -0.23
CLDN4-203ENST00000435050 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
CLDN4-203ENST00000435050 FGRP09769 529 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 BMP6P22004 513 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 FBXO11Q86XK2 927 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 DHX36Q9H2U1 1008 aaKnown RBP13.64□□□□□ -0.23
CLDN4-203ENST00000435050 ARHGEF10LQ9HCE6 1279 aa13.64□□□□□ -0.23
CLDN4-203ENST00000435050 F5H6K3 240 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 KLRC3Q07444 240 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 QRICH1Q2TAL8 776 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 STRIP1Q5VSL9 837 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 TSG101Q99816 390 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 SAMM50Q9Y512 469 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 DDX39AO00148 427 aaKnown RBP13.63□□□□□ -0.23
CLDN4-203ENST00000435050 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
CLDN4-203ENST00000435050 KRT9P35527 623 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 PRCPP42785 496 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 TBC1D8BQ0IIM8 1120 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 TEX35Q5T0J7 233 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 UBXN4Q92575 508 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 PRMT6Q96LA8 375 aaPredicted RBP13.63□□□□□ -0.23
CLDN4-203ENST00000435050 CCDC93Q567U6 631 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 TCERG1LQ5VWI1 586 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 APOBEC3HQ6NTF7 200 aaKnown RBP13.63□□□□□ -0.23
CLDN4-203ENST00000435050 ZBTB21Q9ULJ3 1066 aa13.63□□□□□ -0.23
CLDN4-203ENST00000435050 CASP14P31944 242 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 CACNA2D4Q7Z3S7 1137 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 ZBTB5O15062 677 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 NAA30Q147X3 362 aaPredicted RBP13.62□□□□□ -0.23
CLDN4-203ENST00000435050 HHIPL2Q6UWX4 724 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 NOC4LQ9BVI4 516 aaKnown RBP13.62□□□□□ -0.23
CLDN4-203ENST00000435050 PDGFDQ9GZP0 370 aaPredicted RBP13.62□□□□□ -0.23
CLDN4-203ENST00000435050 JMJD4Q9H9V9 463 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLDN4-203ENST00000435050 MEIS1O00470 390 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 KIF5CO60282 957 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 CCZ1BP86790 482 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 CCZ1P86791 482 aaPredicted RBP13.62□□□□□ -0.23
CLDN4-203ENST00000435050 RBL2Q08999 1139 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 HERC4Q5GLZ8 1057 aaPredicted RBP13.62□□□□□ -0.23
CLDN4-203ENST00000435050 PPP1R13BQ96KQ4 1090 aa13.62□□□□□ -0.23
CLDN4-203ENST00000435050 MKRN1Q9UHC7 482 aaKnown RBP13.62□□□□□ -0.23
CLDN4-203ENST00000435050 TRAF5O00463 557 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 CCDC175P0C221 793 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 BMP3P12645 472 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 POLD1P28340 1107 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 DPYDQ12882 1025 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 ZNF658Q5TYW1 1059 aaPredicted RBP13.61□□□□□ -0.23
CLDN4-203ENST00000435050 ZMYND12Q9H0C1 365 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 KIAA1024Q9UPX6 916 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 SUGT1Q9Y2Z0 365 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 PLSCR1O15162 318 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 ARHGAP6O43182 974 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 SHMT1P34896 483 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 DNA2P51530 1060 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 CBX1P83916 185 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 C15orf52Q6ZUT6 534 aaKnown RBP13.61□□□□□ -0.23
CLDN4-203ENST00000435050 AMNQ9BXJ7 453 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 SPTLC3Q9NUV7 552 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 COPB1P53618 953 aaKnown RBP13.61□□□□□ -0.23
CLDN4-203ENST00000435050 PLS1Q14651 629 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 TDRD12Q587J7 1177 aaKnown RBP13.61□□□□□ -0.23
CLDN4-203ENST00000435050 LUC7L2Q9Y383 392 aaKnown RBP13.61□□□□□ -0.23
CLDN4-203ENST00000435050 GAKO14976 1311 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 COL4A1P02462 1669 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 RRP9O43818 475 aaKnown RBP13.61□□□□□ -0.23
CLDN4-203ENST00000435050 ARID5AQ03989 594 aa13.61□□□□□ -0.23
CLDN4-203ENST00000435050 CNNM4Q6P4Q7 775 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms