RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 FEZ1Q99689 392 aa12.97□□□□□ -0.33
LINC00539-203ENST00000434601 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
LINC00539-203ENST00000434601 KCNJ14Q9UNX9 436 aa12.97□□□□□ -0.33
LINC00539-203ENST00000434601 CNPY2Q9Y2B0 182 aa12.97□□□□□ -0.33
LINC00539-203ENST00000434601 TRIM75PA6NK02 468 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 H0YGN5 161 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 TNPO2O14787 897 aaKnown RBP12.96□□□□□ -0.33
LINC00539-203ENST00000434601 NCLP19338 710 aaKnown RBP12.96□□□□□ -0.33
LINC00539-203ENST00000434601 IRF5Q13568 498 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 GNL2Q13823 731 aaKnown RBP12.96□□□□□ -0.33
LINC00539-203ENST00000434601 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 WWC2Q6AWC2 1192 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 TTBK2Q6IQ55 1244 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 FAM173BQ6P4H8 233 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 DIS3L2Q8IYB7 885 aaKnown RBP12.96□□□□□ -0.33
LINC00539-203ENST00000434601 FAM177A1Q8N128 213 aaPredicted RBP12.96□□□□□ -0.33
LINC00539-203ENST00000434601 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.33
LINC00539-203ENST00000434601 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 PXYLP1Q8TE99 480 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 NUP88Q99567 741 aaPredicted RBP12.96□□□□□ -0.33
LINC00539-203ENST00000434601 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 SH3GLB2Q9NR46 395 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 AGTPBP1Q9UPW5 1226 aa12.96□□□□□ -0.33
LINC00539-203ENST00000434601 TCHHQ07283 1943 aa12.96□□□□□ -0.34
LINC00539-203ENST00000434601 hCG_1984214I3L0E3 225 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 STXBP3O00186 592 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 FIBPO43427 364 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 ADCY3O60266 1144 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 KRT2P35908 639 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 PABPC4Q13310 644 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00539-203ENST00000434601 ADGRF4Q8IZF3 695 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 SPICE1Q8N0Z3 855 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 ZNF713Q8N859 430 aaPredicted RBP12.95□□□□□ -0.34
LINC00539-203ENST00000434601 GPKOWQ92917 476 aaPredicted RBP eCLIP12.95□□□□□ -0.34
LINC00539-203ENST00000434601 COA7Q96BR5 231 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 MTMR8Q96EF0 704 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 PIGSQ96S52 555 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 KIAA1683Q9H0B3 1180 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 FOXP1Q9H334 677 aaPredicted RBP12.95□□□□□ -0.34
LINC00539-203ENST00000434601 JMJD4Q9H9V9 463 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 BARHL2Q9NY43 387 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 NR2E3Q9Y5X4 410 aa12.95□□□□□ -0.34
LINC00539-203ENST00000434601 BAZ2BQ9UIF8 2168 aaKnown RBP12.95□□□□□ -0.34
LINC00539-203ENST00000434601 SGPL1O95470 568 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 U2AF2P26368 475 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC00539-203ENST00000434601 CALML3P27482 149 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 SLC16A2P36021 539 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 GCLCP48506 637 aaPredicted RBP12.94□□□□□ -0.34
LINC00539-203ENST00000434601 FLT3LGP49771 235 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 NLRP5P59047 1200 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 ZYXQ15942 572 aaKnown RBP12.94□□□□□ -0.34
LINC00539-203ENST00000434601 FAM110CQ1W6H9 321 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 KIAA1755Q5JYT7 1200 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 SYDE2Q5VT97 1194 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 ATL3Q6DD88 541 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 BTNL9Q6UXG8 535 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 NOSTRINQ8IVI9 506 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 U2AF1L4Q8WU68 220 aaKnown RBP12.94□□□□□ -0.34
LINC00539-203ENST00000434601 CCDC12Q8WUD4 166 aaPredicted RBP12.94□□□□□ -0.34
LINC00539-203ENST00000434601 LPAR1Q92633 364 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 ZNF396Q96N95 335 aaPredicted RBP12.94□□□□□ -0.34
LINC00539-203ENST00000434601 WDR18Q9BV38 432 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 VAT1LQ9HCJ6 419 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 LMBRD1Q9NUN5 540 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 LOC285556D6RIA3 1793 aa12.94□□□□□ -0.34
LINC00539-203ENST00000434601 RANBP2P49792 3224 aaKnown RBP12.93□□□□□ -0.34
LINC00539-203ENST00000434601 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 BTBD18B2RXH4 712 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 USP17L10C9JJH3 530 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 TMEM232C9JQI7 657 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 ZBTB5O15062 677 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
LINC00539-203ENST00000434601 FARP2O94887 1054 aaPredicted RBP12.93□□□□□ -0.34
LINC00539-203ENST00000434601 STAT2P52630 851 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 USP14P54578 494 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 NAPAP54920 295 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 IKQ13123 557 aaPredicted RBP12.93□□□□□ -0.34
LINC00539-203ENST00000434601 MTMR2Q13614 643 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 NPY5RQ15761 445 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
LINC00539-203ENST00000434601 FAM83BQ5T0W9 1011 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 GALNT17Q6IS24 598 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 TYW1BQ6NUM6 668 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 PPP1R18Q6NYC8 613 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 UBE2Q1Q7Z7E8 422 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 ANKRD13CQ8N6S4 541 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 DAGLBQ8NCG7 672 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 ZNF280CQ8ND82 737 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 SCAND2PQ9GZW5 306 aaPredicted RBP12.93□□□□□ -0.34
LINC00539-203ENST00000434601 UNC93B1Q9H1C4 597 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 CFAP45Q9UL16 551 aa12.93□□□□□ -0.34
LINC00539-203ENST00000434601 ESYT2A0FGR8 921 aa12.92□□□□□ -0.34
LINC00539-203ENST00000434601 PLA2G6O60733 806 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms