RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 NSMFQ6X4W1 530 aa25.71■■□□□ 1.71
RPUSD3-206ENST00000433535 MFSD6Q6ZSS7 791 aa25.71■■□□□ 1.71
RPUSD3-206ENST00000433535 PURBQ96QR8 312 aaKnown RBP25.71■■□□□ 1.71
RPUSD3-206ENST00000433535 CYP39A1Q9NYL5 469 aa25.71■■□□□ 1.71
RPUSD3-206ENST00000433535 KIAA0355O15063 1070 aa25.7■■□□□ 1.7
RPUSD3-206ENST00000433535 ASGR1P07306 291 aa25.7■■□□□ 1.7
RPUSD3-206ENST00000433535 RAG1P15918 1043 aa25.7■■□□□ 1.7
RPUSD3-206ENST00000433535 GJA9P57773 515 aa25.7■■□□□ 1.7
RPUSD3-206ENST00000433535 BTNL9Q6UXG8 535 aa25.7■■□□□ 1.7
RPUSD3-206ENST00000433535 ANKRD33Q7Z3H0 272 aa25.7■■□□□ 1.7
RPUSD3-206ENST00000433535 OSBPL3Q9H4L5 887 aa25.7■■□□□ 1.7
RPUSD3-206ENST00000433535 SPC25Q9HBM1 224 aa25.7■■□□□ 1.7
RPUSD3-206ENST00000433535 TMEM39AQ9NV64 488 aa25.7■■□□□ 1.7
RPUSD3-206ENST00000433535 ASB14A6NK59 587 aa25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 CTAGE5O15320 804 aa25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 PDHBP11177 359 aa25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 PTGS1P23219 599 aa25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 MFAP1P55081 439 aaKnown RBP25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 FAAP100Q0VG06 881 aa25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 CWC27Q6UX04 472 aaKnown RBP25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 NOL8Q76FK4 1167 aaKnown RBP25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 PCSK9Q8NBP7 692 aaKnown RBP25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 GLT1D1Q96MS3 346 aa25.69■■□□□ 1.7
RPUSD3-206ENST00000433535 DCDC2CA8MYV0 355 aa25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 EPHB4P54760 987 aa25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 BEX3Q00994 111 aa25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 TNFAIP2Q03169 654 aa25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 GNASQ5JWF2 1037 aa25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 EEPD1Q7L9B9 569 aa25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 FBXO16Q8IX29 292 aaPredicted RBP25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 FAM161BQ96MY7 647 aa25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 TOX2Q96NM4 488 aa25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 DIAPH3Q9NSV4 1193 aa25.68■■□□□ 1.7
RPUSD3-206ENST00000433535 ELP1O95163 1332 aa25.67■■□□□ 1.7
RPUSD3-206ENST00000433535 NFIBO00712 420 aa25.67■■□□□ 1.7
RPUSD3-206ENST00000433535 PCP11498 1178 aaKnown RBP25.67■■□□□ 1.7
RPUSD3-206ENST00000433535 SLC17A8Q8NDX2 589 aa25.67■■□□□ 1.7
RPUSD3-206ENST00000433535 VTI1AQ96AJ9 217 aa25.67■■□□□ 1.7
RPUSD3-206ENST00000433535 ZKSCAN3Q9BRR0 538 aa25.67■■□□□ 1.7
RPUSD3-206ENST00000433535 RNF41Q9H4P4 317 aaPredicted RBP25.67■■□□□ 1.7
RPUSD3-206ENST00000433535 STXBP5LQ9Y2K9 1186 aa25.67■■□□□ 1.7
RPUSD3-206ENST00000433535 ZNF543Q08ER8 600 aa25.66■■□□□ 1.7
RPUSD3-206ENST00000433535 TLK2Q86UE8 772 aa25.66■■□□□ 1.7
RPUSD3-206ENST00000433535 PDGFCQ9NRA1 345 aa25.66■■□□□ 1.7
RPUSD3-206ENST00000433535 GNEQ9Y223 722 aaKnown RBP25.66■■□□□ 1.7
RPUSD3-206ENST00000433535 A0A0U1RQG5 324 aaPredicted RBP25.65■■□□□ 1.7
RPUSD3-206ENST00000433535 SMPD1P17405 629 aa25.65■■□□□ 1.7
RPUSD3-206ENST00000433535 FPGSQ05932 587 aa25.65■■□□□ 1.7
RPUSD3-206ENST00000433535 BAATQ14032 418 aaPredicted RBP25.65■■□□□ 1.7
RPUSD3-206ENST00000433535 FAM109BQ6ICB4 259 aaPredicted RBP25.65■■□□□ 1.7
RPUSD3-206ENST00000433535 ESR2Q92731 530 aa25.65■■□□□ 1.7
RPUSD3-206ENST00000433535 GUCD1Q96NT3 240 aa25.65■■□□□ 1.7
RPUSD3-206ENST00000433535 TBX21Q9UL17 535 aa25.65■■□□□ 1.7
RPUSD3-206ENST00000433535 COL6A3P12111 3177 aa25.64■■□□□ 1.7
RPUSD3-206ENST00000433535 ZNF213O14771 459 aa25.64■■□□□ 1.7
RPUSD3-206ENST00000433535 SNHG28P0DPA3 235 aa25.64■■□□□ 1.7
RPUSD3-206ENST00000433535 TMEM63BQ5T3F8 832 aa25.64■■□□□ 1.7
RPUSD3-206ENST00000433535 ZNF697Q5TEC3 545 aa25.64■■□□□ 1.7
RPUSD3-206ENST00000433535 SLC30A10Q6XR72 485 aa25.64■■□□□ 1.7
RPUSD3-206ENST00000433535 RNPC3Q96LT9 517 aaKnown RBP25.64■■□□□ 1.7
RPUSD3-206ENST00000433535 TTC14Q96N46 770 aa25.64■■□□□ 1.7
RPUSD3-206ENST00000433535 MROH7Q68CQ1 1323 aa25.63■■□□□ 1.69
RPUSD3-206ENST00000433535 PTPDC1A2A3K4 754 aa25.63■■□□□ 1.69
RPUSD3-206ENST00000433535 CDK7P50613 346 aa25.63■■□□□ 1.69
RPUSD3-206ENST00000433535 NKX3-2P78367 333 aa25.63■■□□□ 1.69
RPUSD3-206ENST00000433535 TAPT1Q6NXT6 567 aa25.63■■□□□ 1.69
RPUSD3-206ENST00000433535 CXCL17Q6UXB2 119 aa25.63■■□□□ 1.69
RPUSD3-206ENST00000433535 ARVCFO00192 962 aa25.62■■□□□ 1.69
RPUSD3-206ENST00000433535 KDM4AO75164 1064 aa25.62■■□□□ 1.69
RPUSD3-206ENST00000433535 GOLGA8HP0CJ92 632 aa25.62■■□□□ 1.69
RPUSD3-206ENST00000433535 ALDH5A1P51649 535 aaPredicted RBP25.62■■□□□ 1.69
RPUSD3-206ENST00000433535 FSCN1Q16658 493 aaKnown RBP25.62■■□□□ 1.69
RPUSD3-206ENST00000433535 CLEC4DQ8WXI8 215 aa25.62■■□□□ 1.69
RPUSD3-206ENST00000433535 CPVLQ9H3G5 476 aa25.62■■□□□ 1.69
RPUSD3-206ENST00000433535 B4E1Z4 1266 aa25.61■■□□□ 1.69
RPUSD3-206ENST00000433535 TIMP1P01033 207 aa25.61■■□□□ 1.69
RPUSD3-206ENST00000433535 CALML3P27482 149 aa25.61■■□□□ 1.69
RPUSD3-206ENST00000433535 FAM126BQ8IXS8 530 aa25.61■■□□□ 1.69
RPUSD3-206ENST00000433535 MORC4Q8TE76 937 aa25.61■■□□□ 1.69
RPUSD3-206ENST00000433535 AP5M1Q9H0R1 490 aa25.61■■□□□ 1.69
RPUSD3-206ENST00000433535 VTA1Q9NP79 307 aa25.61■■□□□ 1.69
RPUSD3-206ENST00000433535 HIP1O00291 1037 aa25.6■■□□□ 1.69
RPUSD3-206ENST00000433535 DYNC1LI2O43237 492 aaPredicted RBP25.6■■□□□ 1.69
RPUSD3-206ENST00000433535 IL25Q9H293 177 aa25.6■■□□□ 1.69
RPUSD3-206ENST00000433535 ADD3Q9UEY8 706 aaKnown RBP25.6■■□□□ 1.69
RPUSD3-206ENST00000433535 SMAD3P84022 425 aaKnown RBP25.59■■□□□ 1.69
RPUSD3-206ENST00000433535 IQSEC1Q6DN90 963 aa25.59■■□□□ 1.69
RPUSD3-206ENST00000433535 RNF207Q6ZRF8 634 aa25.59■■□□□ 1.69
RPUSD3-206ENST00000433535 KIAA1211Q6ZU35 1233 aa25.59■■□□□ 1.69
RPUSD3-206ENST00000433535 DGKHQ86XP1 1220 aa25.59■■□□□ 1.69
RPUSD3-206ENST00000433535 DSCC1Q9BVC3 393 aa25.59■■□□□ 1.69
RPUSD3-206ENST00000433535 PPP1R12CQ9BZL4 782 aa25.59■■□□□ 1.69
RPUSD3-206ENST00000433535 SUPT16HQ9Y5B9 1047 aaKnown RBP25.59■■□□□ 1.69
RPUSD3-206ENST00000433535 WDR19Q8NEZ3 1342 aa25.59■■□□□ 1.69
RPUSD3-206ENST00000433535 PDE4AP27815 886 aa25.58■■□□□ 1.69
RPUSD3-206ENST00000433535 USH1GQ495M9 461 aa25.58■■□□□ 1.69
RPUSD3-206ENST00000433535 GPATCH4Q5T3I0 446 aaKnown RBP25.58■■□□□ 1.69
RPUSD3-206ENST00000433535 IQCA1Q86XH1 822 aa25.58■■□□□ 1.69
RPUSD3-206ENST00000433535 PNMA1Q8ND90 353 aa25.58■■□□□ 1.69
RPUSD3-206ENST00000433535 UBA5Q9GZZ9 404 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms