RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 C12orf60Q5U649 245 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 DGKHQ86XP1 1220 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 POLLQ9UGP5 575 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 PCP11498 1178 aaKnown RBP13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 AMNQ9BXJ7 453 aa13.91□□□□□ -0.18
LRRTM1-206ENST00000433224 SLURP2P0DP57 97 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 BMP3P12645 472 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 KRT13P13646 458 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 ALX1Q15699 326 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 DALRD3Q5D0E6 543 aaKnown RBP13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 CNNM4Q6P4Q7 775 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 EEPD1Q7L9B9 569 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 CTNNBL1Q8WYA6 563 aaPredicted RBP13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 CCDC17Q96LX7 622 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 MRPL44Q9H9J2 332 aaKnown RBP13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 CYLC1P35663 651 aaPredicted RBP13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 POTEMA6NI47 508 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 EEF2P13639 858 aaKnown RBP13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 PAFAH1B1P43034 410 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 HAUS3Q68CZ6 603 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 PODNQ7Z5L7 613 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 PLEKHA4Q9H4M7 779 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 PPP2R2CQ9Y2T4 447 aa13.9□□□□□ -0.18
LRRTM1-206ENST00000433224 TMEM110-MUSTN1A8MSY1 372 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 AP5Z1O43299 807 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 RPN1P04843 607 aaKnown RBP13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 GJC1P36383 396 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 CDR1P51861 262 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 KMT5BQ4FZB7 885 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 RNF187Q5TA31 235 aaPredicted RBP13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 RASGRP2Q7LDG7 609 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 GPATCH11Q8N954 259 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 HINFPQ9BQA5 517 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 ZBED4O75132 1171 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 CLCN6P51797 869 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 CCDC122Q5T0U0 273 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 CIAPIN1Q6FI81 312 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 GJA10Q969M2 543 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 ST7Q9NRC1 585 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 LRRC4BQ9NT99 713 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 HPS5Q9UPZ3 1129 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 GDAQ9Y2T3 454 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 PPP6R2O75170 966 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 EVX2Q03828 476 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 HLTFQ14527 1009 aaKnown RBP eCLIP13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 CDC37Q16543 378 aaPredicted RBP13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 GPATCH4Q5T3I0 446 aaKnown RBP13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 TMC4Q7Z404 712 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 PLA2G4DQ86XP0 818 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 SP8Q8IXZ3 490 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 IPO4Q8TEX9 1081 aaKnown RBP13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 MAN1B1Q9UKM7 699 aa13.89□□□□□ -0.19
LRRTM1-206ENST00000433224 CNTNAP4Q9C0A0 1308 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 ZSCAN20P17040 1043 aaPredicted RBP13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 GRIN1Q05586 938 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 KIF5AQ12840 1032 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 NFIAQ12857 509 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 SPECC1LQ69YQ0 1117 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 SGMS1Q86VZ5 419 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 ZNF341Q9BYN7 854 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 BCCIPQ9P287 314 aaKnown RBP eCLIP13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 DDX41Q9UJV9 622 aaKnown RBP13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 FGFR2P21802 821 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 CYP2J2P51589 502 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 TNFAIP1Q13829 316 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 MORC3Q14149 939 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 ASPRV1Q53RT3 343 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 GADL1Q6ZQY3 521 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 EPC1Q9H2F5 836 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 PIM2Q9P1W9 311 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 IFT172Q9UG01 1749 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 HDXQ7Z353 690 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 ANKRD13CQ8N6S4 541 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 RASSF4Q9H2L5 321 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 ATP6V0A2Q9Y487 856 aa13.88□□□□□ -0.19
LRRTM1-206ENST00000433224 CETN3O15182 167 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 PLCG1P19174 1290 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 ZSCAN26Q16670 478 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 SHC4Q6S5L8 630 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 FLT1P17948 1338 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 SFI1A8K8P3 1242 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 GCOM1H8Y6P7 765 aaPredicted RBP13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 POLR2MP0CAP2 368 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 CDC25BP30305 580 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 ST3GAL1Q11201 340 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 KCNJ12Q14500 433 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 FAM83BQ5T0W9 1011 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 TNS2Q63HR2 1409 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 SLC51AQ86UW1 340 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 CNGA4Q8IV77 575 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 SRPRBQ9Y5M8 271 aaKnown RBP13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 RGPD8O14715 1765 aaPredicted RBP13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 F5H6K3 240 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 SLFN14P0C7P3 912 aa13.87□□□□□ -0.19
LRRTM1-206ENST00000433224 EIF2AK2P19525 551 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms