RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 RAD9AQ99638 391 aa18.98■□□□□ 0.63
NUP50-209ENST00000432340 NOD1Q9Y239 953 aa18.98■□□□□ 0.63
NUP50-209ENST00000432340 ASTN1O14525 1302 aa18.98■□□□□ 0.63
NUP50-209ENST00000432340 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.97■□□□□ 0.63
NUP50-209ENST00000432340 NCK2O43639 380 aa18.97■□□□□ 0.63
NUP50-209ENST00000432340 CPT1AP50416 773 aa18.97■□□□□ 0.63
NUP50-209ENST00000432340 BMP8AQ7Z5Y6 402 aa18.97■□□□□ 0.63
NUP50-209ENST00000432340 SUGP1Q8IWZ8 645 aaKnown RBP18.97■□□□□ 0.63
NUP50-209ENST00000432340 C19orf67A6NJJ6 358 aa18.96■□□□□ 0.63
NUP50-209ENST00000432340 SMPD1P17405 629 aa18.96■□□□□ 0.63
NUP50-209ENST00000432340 PTPN11Q06124 597 aaPredicted RBP18.96■□□□□ 0.63
NUP50-209ENST00000432340 FAM47CQ5HY64 1035 aa18.96■□□□□ 0.63
NUP50-209ENST00000432340 ERMP1Q7Z2K6 904 aa18.96■□□□□ 0.63
NUP50-209ENST00000432340 FGD4Q96M96 766 aa18.96■□□□□ 0.63
NUP50-209ENST00000432340 ACAD9Q9H845 621 aa18.96■□□□□ 0.63
NUP50-209ENST00000432340 ATP8A2Q9NTI2 1148 aa18.96■□□□□ 0.63
NUP50-209ENST00000432340 MTUS1Q9ULD2 1270 aa18.96■□□□□ 0.63
NUP50-209ENST00000432340 COG6Q9Y2V7 657 aa18.96■□□□□ 0.63
NUP50-209ENST00000432340 KPNA6O60684 536 aa18.95■□□□□ 0.62
NUP50-209ENST00000432340 CDK8P49336 464 aa18.95■□□□□ 0.62
NUP50-209ENST00000432340 HERC4Q5GLZ8 1057 aaPredicted RBP18.95■□□□□ 0.62
NUP50-209ENST00000432340 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
NUP50-209ENST00000432340 NFRKBQ6P4R8 1299 aa18.95■□□□□ 0.62
NUP50-209ENST00000432340 FAM133AQ8N9E0 248 aa18.95■□□□□ 0.62
NUP50-209ENST00000432340 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.95■□□□□ 0.62
NUP50-209ENST00000432340 ARHGAP45Q92619 1136 aa18.95■□□□□ 0.62
NUP50-209ENST00000432340 MRPL38Q96DV4 380 aaKnown RBP18.95■□□□□ 0.62
NUP50-209ENST00000432340 DYNLL2Q96FJ2 89 aa18.95■□□□□ 0.62
NUP50-209ENST00000432340 MTG1Q9BT17 334 aaPredicted RBP18.95■□□□□ 0.62
NUP50-209ENST00000432340 SLC38A10Q9HBR0 1119 aa18.95■□□□□ 0.62
NUP50-209ENST00000432340 DBNLQ9UJU6 430 aaKnown RBP18.95■□□□□ 0.62
NUP50-209ENST00000432340 RAD50Q92878 1312 aa18.95■□□□□ 0.62
NUP50-209ENST00000432340 MYH1P12882 1939 aa18.94■□□□□ 0.62
NUP50-209ENST00000432340 PNMA6EA0A0J9YXQ4 647 aa18.94■□□□□ 0.62
NUP50-209ENST00000432340 ABHD14A-ACY1A0A1B0GW23 586 aa18.94■□□□□ 0.62
NUP50-209ENST00000432340 GJB5O95377 273 aa18.94■□□□□ 0.62
NUP50-209ENST00000432340 WDR5P61964 334 aaKnown RBP18.94■□□□□ 0.62
NUP50-209ENST00000432340 FBXO22Q8NEZ5 403 aa18.94■□□□□ 0.62
NUP50-209ENST00000432340 CAGE1Q8TC20 777 aa18.94■□□□□ 0.62
NUP50-209ENST00000432340 SDR42E1Q8WUS8 393 aa18.94■□□□□ 0.62
NUP50-209ENST00000432340 PABPC5Q96DU9 382 aaKnown RBP18.94■□□□□ 0.62
NUP50-209ENST00000432340 RAVER2Q9HCJ3 691 aaKnown RBP18.94■□□□□ 0.62
NUP50-209ENST00000432340 VTA1Q9NP79 307 aa18.94■□□□□ 0.62
NUP50-209ENST00000432340 ZDBF2Q9HCK1 2354 aa18.93■□□□□ 0.62
NUP50-209ENST00000432340 GBF1Q92538 1859 aa18.93■□□□□ 0.62
NUP50-209ENST00000432340 H3BQ06 376 aaPredicted RBP18.93■□□□□ 0.62
NUP50-209ENST00000432340 PRSS33Q8NF86 280 aa18.93■□□□□ 0.62
NUP50-209ENST00000432340 AFAP1L1Q8TED9 768 aa18.93■□□□□ 0.62
NUP50-209ENST00000432340 KIFC2Q96AC6 838 aa18.93■□□□□ 0.62
NUP50-209ENST00000432340 SAMD11Q96NU1 681 aa18.93■□□□□ 0.62
NUP50-209ENST00000432340 PHOX2BQ99453 314 aa18.93■□□□□ 0.62
NUP50-209ENST00000432340 FEM1BQ9UK73 627 aa18.93■□□□□ 0.62
NUP50-209ENST00000432340 LCHNA4D1U4 455 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 F5H6K3 240 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 SURF6O75683 361 aaKnown RBP18.92■□□□□ 0.62
NUP50-209ENST00000432340 CYP2D6P10635 497 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 PURAQ00577 322 aaKnown RBP18.92■□□□□ 0.62
NUP50-209ENST00000432340 KLRC3Q07444 240 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 TKFCQ3LXA3 575 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 DUSP28Q4G0W2 176 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 CNKSR3Q6P9H4 555 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 EP400NLQ6ZTU2 488 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 KIAA1211Q6ZU35 1233 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 C16orf86Q6ZW13 317 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 PBXIP1Q96AQ6 731 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 BRWD1Q9NSI6 2320 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 CDK5RAP2Q96SN8 1893 aa18.92■□□□□ 0.62
NUP50-209ENST00000432340 LINC01553A4QN01 128 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 MYL3P08590 195 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 PDE6AP16499 860 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 CNTN2Q02246 1040 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 C12orf60Q5U649 245 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 BANK1Q8NDB2 785 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 EDAQ92838 391 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 ANTXR1Q9H6X2 564 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 NYAP2Q9P242 653 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 INSL6Q9Y581 213 aa18.91■□□□□ 0.62
NUP50-209ENST00000432340 ZNFX1Q9P2E3 1918 aaKnown RBP18.9■□□□□ 0.62
NUP50-209ENST00000432340 NDUFB10O96000 172 aa18.9■□□□□ 0.62
NUP50-209ENST00000432340 IRS1P35568 1242 aa18.9■□□□□ 0.62
NUP50-209ENST00000432340 NUP88Q99567 741 aaPredicted RBP18.9■□□□□ 0.62
NUP50-209ENST00000432340 CCDC8Q9H0W5 538 aaPredicted RBP18.9■□□□□ 0.62
NUP50-209ENST00000432340 HOMER2Q9NSB8 354 aa18.9■□□□□ 0.62
NUP50-209ENST00000432340 SYNPO2Q9UMS6 1093 aa18.9■□□□□ 0.62
NUP50-209ENST00000432340 TRANK1O15050 2925 aa18.9■□□□□ 0.62
NUP50-209ENST00000432340 IPO8O15397 1037 aaKnown RBP18.89■□□□□ 0.61
NUP50-209ENST00000432340 EVX2Q03828 476 aa18.89■□□□□ 0.61
NUP50-209ENST00000432340 SLFN5Q08AF3 891 aa18.89■□□□□ 0.61
NUP50-209ENST00000432340 NBPF20Q3BBV1 942 aa18.89■□□□□ 0.61
NUP50-209ENST00000432340 SPRED2Q7Z698 418 aa18.89■□□□□ 0.61
NUP50-209ENST00000432340 RPAP2Q8IXW5 612 aaPredicted RBP18.89■□□□□ 0.61
NUP50-209ENST00000432340 MUTYHQ9UIF7 546 aa18.89■□□□□ 0.61
NUP50-209ENST00000432340 LOC102724159A0A0B4J2E5 919 aa18.88■□□□□ 0.61
NUP50-209ENST00000432340 IKBKEQ14164 716 aa18.88■□□□□ 0.61
NUP50-209ENST00000432340 POLA2Q14181 598 aa18.88■□□□□ 0.61
NUP50-209ENST00000432340 PWP2Q15269 919 aaKnown RBP18.88■□□□□ 0.61
NUP50-209ENST00000432340 SMAD2Q15796 467 aaKnown RBP18.88■□□□□ 0.61
NUP50-209ENST00000432340 TAPT1Q6NXT6 567 aa18.88■□□□□ 0.61
NUP50-209ENST00000432340 FBXO16Q8IX29 292 aaPredicted RBP18.88■□□□□ 0.61
NUP50-209ENST00000432340 FAM9BQ8IZU0 186 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms