RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TMEM39BQ9GZU3 492 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 BLZF1Q9H2G9 400 aa22.15■■□□□ 1.14
VRK2-205ENST00000432057 A0A1W2PRG0 241 aa22.14■■□□□ 1.13
VRK2-205ENST00000432057 CLK2P49760 499 aaKnown RBP22.14■■□□□ 1.13
VRK2-205ENST00000432057 FANCCQ00597 558 aa22.14■■□□□ 1.13
VRK2-205ENST00000432057 ORC2Q13416 577 aaPredicted RBP22.14■■□□□ 1.13
VRK2-205ENST00000432057 GMCL1Q96IK5 515 aa22.14■■□□□ 1.13
VRK2-205ENST00000432057 SMCHD1A6NHR9 2005 aa22.14■■□□□ 1.13
VRK2-205ENST00000432057 EDIL3O43854 480 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 LRMPQ12912 555 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 TRMT44Q8IYL2 757 aaKnown RBP22.13■■□□□ 1.13
VRK2-205ENST00000432057 ZBED3Q96IU2 234 aaPredicted RBP22.13■■□□□ 1.13
VRK2-205ENST00000432057 FANCLQ9NW38 375 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 GTPBP6O43824 516 aaPredicted RBP22.13■■□□□ 1.13
VRK2-205ENST00000432057 TDP2O95551 362 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 UBA7P41226 1012 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 CUL4BQ13620 913 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 FKBP1CQ5VVH2 108 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 RASSF8Q8NHQ8 419 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 JDP2Q8WYK2 163 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 GSDMAQ96QA5 445 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 CCSER1Q9C0I3 900 aa22.13■■□□□ 1.13
VRK2-205ENST00000432057 SLC37A4O43826 429 aa22.12■■□□□ 1.13
VRK2-205ENST00000432057 SNAP25P60880 206 aa22.12■■□□□ 1.13
VRK2-205ENST00000432057 NBPF9Q3BBW0 867 aa22.12■■□□□ 1.13
VRK2-205ENST00000432057 NAALADL2Q58DX5 795 aa22.12■■□□□ 1.13
VRK2-205ENST00000432057 BMP3P12645 472 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 ECE1P42892 770 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 MRPL12P52815 198 aaKnown RBP22.11■■□□□ 1.13
VRK2-205ENST00000432057 IKQ13123 557 aaPredicted RBP22.11■■□□□ 1.13
VRK2-205ENST00000432057 CACTINQ8WUQ7 758 aaKnown RBP22.11■■□□□ 1.13
VRK2-205ENST00000432057 MED15Q96RN5 788 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 PLIN2Q99541 437 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 PSTPIP2Q9H939 334 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 MYOZ2Q9NPC6 264 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 ZBTB21Q9ULJ3 1066 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 PCDHA1Q9Y5I3 950 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 TMEM232C9JQI7 657 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 WNT10BO00744 389 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 MYO1BO43795 1136 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 OFD1O75665 1012 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 CD44P16070 742 aaKnown RBP22.11■■□□□ 1.13
VRK2-205ENST00000432057 SYDE2Q5VT97 1194 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 RRAGBQ5VZM2 374 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 FILIP1Q7Z7B0 1213 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 FAM83AQ86UY5 434 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 CABP7Q86V35 215 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 SMYD4Q8IYR2 804 aaPredicted RBP22.11■■□□□ 1.13
VRK2-205ENST00000432057 AK8Q96MA6 479 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 ARHGEF10LQ9HCE6 1279 aa22.11■■□□□ 1.13
VRK2-205ENST00000432057 TECP42680 631 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 ARID5BQ14865 1188 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 CALCRLQ16602 461 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 SPICE1Q8N0Z3 855 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 ENOX1Q8TC92 643 aaKnown RBP22.1■■□□□ 1.13
VRK2-205ENST00000432057 KIAA1524Q8TCG1 905 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 ACER1Q8TDN7 264 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 LRRC15Q8TF66 581 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 DPF2Q92785 391 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.1■■□□□ 1.13
VRK2-205ENST00000432057 BCS1LQ9Y276 419 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 NFE2L3Q9Y4A8 694 aa22.1■■□□□ 1.13
VRK2-205ENST00000432057 HSP90AA4PQ58FG1 418 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 MIGA2Q7L4E1 593 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 MTMR9Q96QG7 549 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L15C9J2P7 530 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L13C9JLJ4 530 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L11C9JVI0 530 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L18D6R9N7 530 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L22D6RA61 530 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L17D6RBQ6 530 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L19D6RCP7 530 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L20D6RJB6 530 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 SERPINC1P01008 464 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 TXKP42681 527 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L24Q0WX57 530 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 NOLC1Q14978 699 aaKnown RBP eCLIP22.09■■□□□ 1.13
VRK2-205ENST00000432057 KIAA1755Q5JYT7 1200 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 USP17L6PQ6QN14 398 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.09■■□□□ 1.13
VRK2-205ENST00000432057 TMC6Q7Z403 805 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 PGAP2Q9UHJ9 254 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 SYNPO2Q9UMS6 1093 aa22.09■■□□□ 1.13
VRK2-205ENST00000432057 SCAF8Q9UPN6 1271 aaKnown RBP22.09■■□□□ 1.13
VRK2-205ENST00000432057 SYNRGQ9UMZ2 1314 aa22.08■■□□□ 1.13
VRK2-205ENST00000432057 PLCG1P19174 1290 aa22.08■■□□□ 1.13
VRK2-205ENST00000432057 ERCC5P28715 1186 aaPredicted RBP22.08■■□□□ 1.13
VRK2-205ENST00000432057 RASSF7Q02833 373 aa22.08■■□□□ 1.13
VRK2-205ENST00000432057 TNIP1Q15025 636 aa22.08■■□□□ 1.13
VRK2-205ENST00000432057 KLHL10Q6JEL2 608 aa22.08■■□□□ 1.13
VRK2-205ENST00000432057 PSDA5PKW4 1024 aaPredicted RBP22.07■■□□□ 1.12
VRK2-205ENST00000432057 RPN1P04843 607 aaKnown RBP22.07■■□□□ 1.12
VRK2-205ENST00000432057 TAL1P17542 331 aaPredicted RBP22.07■■□□□ 1.12
VRK2-205ENST00000432057 UBASH3AP57075 661 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 BTNL9Q6UXG8 535 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 IGSF22Q8N9C0 903 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 AMNQ9BXJ7 453 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 PPP1R3GB7ZBB8 358 aa22.07■■□□□ 1.12
VRK2-205ENST00000432057 TBC1D12O60347 775 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms