RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 RASGRP2Q7LDG7 609 aa17.82■□□□□ 0.44
HERC3-206ENST00000431413 IQCA1Q86XH1 822 aa17.82■□□□□ 0.44
HERC3-206ENST00000431413 CYP39A1Q9NYL5 469 aa17.82■□□□□ 0.44
HERC3-206ENST00000431413 ADD3Q9UEY8 706 aaKnown RBP17.82■□□□□ 0.44
HERC3-206ENST00000431413 CTNNA3Q9UI47 895 aa17.82■□□□□ 0.44
HERC3-206ENST00000431413 FRMPD2Q68DX3 1309 aaPredicted RBP17.81■□□□□ 0.44
HERC3-206ENST00000431413 TRIM43BA6NCK2 446 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 SOWAHBA6NEL2 793 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 PDHBP11177 359 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 RAG1P15918 1043 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 MUM1L1Q5H9M0 696 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 GPATCH4Q5T3I0 446 aaKnown RBP17.81■□□□□ 0.44
HERC3-206ENST00000431413 CCSAPQ6IQ19 270 aaPredicted RBP17.81■□□□□ 0.44
HERC3-206ENST00000431413 ANKRD33Q7Z3H0 272 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 SH3RF1Q7Z6J0 888 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 DGKHQ86XP1 1220 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 TBC1D10CQ8IV04 446 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 TRIM43Q96BQ3 446 aaPredicted RBP17.81■□□□□ 0.44
HERC3-206ENST00000431413 UPF3AQ9H1J1 476 aaKnown RBP17.81■□□□□ 0.44
HERC3-206ENST00000431413 TMEM39AQ9NV64 488 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 LAMA3Q16787 3333 aa17.81■□□□□ 0.44
HERC3-206ENST00000431413 KIAA0355O15063 1070 aa17.8■□□□□ 0.44
HERC3-206ENST00000431413 ASGR1P07306 291 aa17.8■□□□□ 0.44
HERC3-206ENST00000431413 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
HERC3-206ENST00000431413 IMMTQ16891 758 aaKnown RBP17.8■□□□□ 0.44
HERC3-206ENST00000431413 MPHOSPH6Q99547 160 aaKnown RBP17.8■□□□□ 0.44
HERC3-206ENST00000431413 DSCC1Q9BVC3 393 aa17.8■□□□□ 0.44
HERC3-206ENST00000431413 KATNBL1Q9H079 304 aa17.8■□□□□ 0.44
HERC3-206ENST00000431413 AP5M1Q9H0R1 490 aa17.8■□□□□ 0.44
HERC3-206ENST00000431413 SUPT16HQ9Y5B9 1047 aaKnown RBP17.8■□□□□ 0.44
HERC3-206ENST00000431413 LOC102724159A0A0B4J2E5 919 aa17.79■□□□□ 0.44
HERC3-206ENST00000431413 A0A0U1RQG5 324 aaPredicted RBP17.79■□□□□ 0.44
HERC3-206ENST00000431413 PWP2Q15269 919 aaKnown RBP17.79■□□□□ 0.44
HERC3-206ENST00000431413 IQSEC1Q6DN90 963 aa17.79■□□□□ 0.44
HERC3-206ENST00000431413 VTA1Q9NP79 307 aa17.79■□□□□ 0.44
HERC3-206ENST00000431413 NEDD4P46934 1319 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 PTPDC1A2A3K4 754 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 MYADML2A6NDP7 307 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 ADCY6O43306 1168 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 ZEB2O60315 1214 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 KDM4AO75164 1064 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 CABYRO75952 493 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 SNHG28P0DPA3 235 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 NKX3-2P78367 333 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 BAATQ14032 418 aaPredicted RBP17.78■□□□□ 0.44
HERC3-206ENST00000431413 SHHQ15465 462 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 FAM109BQ6ICB4 259 aaPredicted RBP17.78■□□□□ 0.44
HERC3-206ENST00000431413 Q7L0L9 218 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 ZKSCAN3Q9BRR0 538 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 KRT23Q9C075 422 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
HERC3-206ENST00000431413 WDR19Q8NEZ3 1342 aa17.77■□□□□ 0.44
HERC3-206ENST00000431413 B4DLN1 442 aa17.77■□□□□ 0.44
HERC3-206ENST00000431413 TLR3O15455 904 aaKnown RBP17.77■□□□□ 0.44
HERC3-206ENST00000431413 MRPL12P52815 198 aaKnown RBP17.77■□□□□ 0.44
HERC3-206ENST00000431413 FPGSQ05932 587 aa17.77■□□□□ 0.44
HERC3-206ENST00000431413 FAAP100Q0VG06 881 aa17.77■□□□□ 0.44
HERC3-206ENST00000431413 EEPD1Q7L9B9 569 aa17.77■□□□□ 0.44
HERC3-206ENST00000431413 TLK2Q86UE8 772 aa17.77■□□□□ 0.44
HERC3-206ENST00000431413 CNNM2Q9H8M5 875 aa17.77■□□□□ 0.44
HERC3-206ENST00000431413 MTMR10Q9NXD2 777 aa17.77■□□□□ 0.44
HERC3-206ENST00000431413 Q9Y3F1 56 aa17.77■□□□□ 0.44
HERC3-206ENST00000431413 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.76■□□□□ 0.43
HERC3-206ENST00000431413 ARVCFO00192 962 aa17.76■□□□□ 0.43
HERC3-206ENST00000431413 NFIBO00712 420 aa17.76■□□□□ 0.43
HERC3-206ENST00000431413 FSCN1Q16658 493 aaKnown RBP17.76■□□□□ 0.43
HERC3-206ENST00000431413 C9orf50Q5SZB4 431 aa17.76■□□□□ 0.43
HERC3-206ENST00000431413 RNF207Q6ZRF8 634 aa17.76■□□□□ 0.43
HERC3-206ENST00000431413 KIAA1211Q6ZU35 1233 aa17.76■□□□□ 0.43
HERC3-206ENST00000431413 FBXO16Q8IX29 292 aaPredicted RBP17.76■□□□□ 0.43
HERC3-206ENST00000431413 PNMA1Q8ND90 353 aa17.76■□□□□ 0.43
HERC3-206ENST00000431413 MORC4Q8TE76 937 aa17.76■□□□□ 0.43
HERC3-206ENST00000431413 ZSCAN10Q96SZ4 725 aaPredicted RBP17.76■□□□□ 0.43
HERC3-206ENST00000431413 SEZ6LQ9BYH1 1024 aa17.76■□□□□ 0.43
HERC3-206ENST00000431413 GNEQ9Y223 722 aaKnown RBP17.76■□□□□ 0.43
HERC3-206ENST00000431413 STXBP5LQ9Y2K9 1186 aa17.76■□□□□ 0.43
HERC3-206ENST00000431413 LTBP2Q14767 1821 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 B4E1Z4 1266 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 DYNC1LI2O43237 492 aaPredicted RBP17.75■□□□□ 0.43
HERC3-206ENST00000431413 TIMP1P01033 207 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 SMPD1P17405 629 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 CALML3P27482 149 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 CDK7P50613 346 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 ALDH5A1P51649 535 aaPredicted RBP17.75■□□□□ 0.43
HERC3-206ENST00000431413 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
HERC3-206ENST00000431413 BEX3Q00994 111 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 ZNF697Q5TEC3 545 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 TAPT1Q6NXT6 567 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 SLC17A8Q8NDX2 589 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 RUFY2Q8WXA3 655 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 ANKS1AQ92625 1134 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 UBAC1Q9BSL1 405 aa17.75■□□□□ 0.43
HERC3-206ENST00000431413 ASTN1O14525 1302 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 MCM3APO60318 1980 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 CTAGE5O15320 804 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 GOLGA8HP0CJ92 632 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 ITGB8P26012 769 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 ASPRV1Q53RT3 343 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 TTC22Q5TAA0 569 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms