RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 SIAH1Q8IUQ4 282 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 CYP2W1Q8TAV3 490 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 CCDC12Q8WUD4 166 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-205ENST00000431183 SAMM50Q9Y512 469 aa12.8□□□□□ -0.36
SMPD4-205ENST00000431183 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 TRAF5O00463 557 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 MEIS1O00470 390 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 YEATS4O95619 227 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 STAT3P40763 770 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 ASPRV1Q53RT3 343 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 SMAP1Q8IYB5 467 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-205ENST00000431183 C17orf53Q8N3J3 647 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-205ENST00000431183 CCPG1Q9ULG6 757 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 PRR12Q9ULL5 1215 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 CAP2P40123 477 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 STAT6P42226 847 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 ZBTB5O15062 677 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 ASNSP08243 561 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 TSC1Q92574 1164 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 CUL5Q93034 780 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 HPS3Q969F9 1004 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 HOOK2Q96ED9 719 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 CLMNQ96JQ2 1002 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 CBX8Q9HC52 389 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 GOPCQ9HD26 462 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 PCDHA5Q9Y5H7 936 aa12.79□□□□□ -0.36
SMPD4-205ENST00000431183 DUOX1Q9NRD9 1551 aa12.78□□□□□ -0.36
SMPD4-205ENST00000431183 NEMFO60524 1076 aa12.78□□□□□ -0.36
SMPD4-205ENST00000431183 TXLNAP40222 546 aa12.78□□□□□ -0.36
SMPD4-205ENST00000431183 MRPL12P52815 198 aaKnown RBP12.78□□□□□ -0.36
SMPD4-205ENST00000431183 AXDND1Q5T1B0 1012 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-205ENST00000431183 GPRC5DQ9NZD1 345 aa12.78□□□□□ -0.36
SMPD4-205ENST00000431183 COL4A5P29400 1685 aa12.78□□□□□ -0.36
SMPD4-205ENST00000431183 COL11A2P13942 1736 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-205ENST00000431183 KRT18P05783 430 aaKnown RBP12.78□□□□□ -0.36
SMPD4-205ENST00000431183 HDLBPQ00341 1268 aaKnown RBP12.78□□□□□ -0.36
SMPD4-205ENST00000431183 PPP2R5BQ15173 497 aa12.78□□□□□ -0.36
SMPD4-205ENST00000431183 TTC12Q9H892 705 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-205ENST00000431183 TCEAL9Q9UHQ7 104 aa12.78□□□□□ -0.36
SMPD4-205ENST00000431183 PNMA6FA0A0J9YX94 578 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.36
SMPD4-205ENST00000431183 SNW1Q13573 536 aaKnown RBP12.77□□□□□ -0.36
SMPD4-205ENST00000431183 GPATCH4Q5T3I0 446 aaKnown RBP12.77□□□□□ -0.36
SMPD4-205ENST00000431183 FBXL16Q8N461 479 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 ADAMTSL1Q8N6G6 1762 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 COL24A1Q17RW2 1714 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 PTPAQ15257 358 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 CALCRLQ16602 461 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 NEK8Q86SG6 692 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 AMNQ9BXJ7 453 aa12.77□□□□□ -0.36
SMPD4-205ENST00000431183 LAMA4Q16363 1823 aa12.77□□□□□ -0.37
SMPD4-205ENST00000431183 SLC37A4O43826 429 aa12.77□□□□□ -0.37
SMPD4-205ENST00000431183 TERF1P54274 439 aa12.77□□□□□ -0.37
SMPD4-205ENST00000431183 ZNF445P59923 1031 aa12.77□□□□□ -0.37
SMPD4-205ENST00000431183 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-205ENST00000431183 MAP3K14Q99558 947 aa12.77□□□□□ -0.37
SMPD4-205ENST00000431183 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
SMPD4-205ENST00000431183 DYNC1I1O14576 645 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 WNK4Q96J92 1243 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-205ENST00000431183 HERC5Q9UII4 1024 aaKnown RBP12.76□□□□□ -0.37
SMPD4-205ENST00000431183 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
SMPD4-205ENST00000431183 CBX1P83916 185 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 RRAGBQ5VZM2 374 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 FMR1NBQ8N0W7 255 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-205ENST00000431183 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 A0A087X0B3 334 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 CUTAO60888 179 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 CLSTN1O94985 981 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 CMA1P23946 247 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 NPY5RQ15761 445 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 ATG4CQ96DT6 458 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 FBXO2Q9UK22 296 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-205ENST00000431183 ZKSCAN5Q9Y2L8 839 aa12.76□□□□□ -0.37
SMPD4-205ENST00000431183 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-205ENST00000431183 SERPINC1P01008 464 aa12.75□□□□□ -0.37
SMPD4-205ENST00000431183 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-205ENST00000431183 MTERF4Q7Z6M4 381 aaKnown RBP12.75□□□□□ -0.37
SMPD4-205ENST00000431183 TMEM87AQ8NBN3 555 aa12.75□□□□□ -0.37
SMPD4-205ENST00000431183 DDX25Q9UHL0 483 aaKnown RBP12.75□□□□□ -0.37
SMPD4-205ENST00000431183 CSADQ9Y600 493 aa12.75□□□□□ -0.37
SMPD4-205ENST00000431183 CPLX3Q8WVH0 158 aa12.75□□□□□ -0.37
SMPD4-205ENST00000431183 LRWD1Q9UFC0 647 aa12.75□□□□□ -0.37
SMPD4-205ENST00000431183 ELP1O95163 1332 aa12.75□□□□□ -0.37
SMPD4-205ENST00000431183 TESPA1A2RU30 521 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-205ENST00000431183 SNX29Q8TEQ0 813 aa12.75□□□□□ -0.37
SMPD4-205ENST00000431183 LZTS2Q9BRK4 669 aa12.75□□□□□ -0.37
SMPD4-205ENST00000431183 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
SMPD4-205ENST00000431183 NFIBO00712 420 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 ZNF500O60304 480 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-205ENST00000431183 SPZ1Q9BXG8 430 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 NYAP2Q9P242 653 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 PTPREP23469 700 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 ASIC1P78348 528 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 GOLGA8FQ08AF8 430 aa12.74□□□□□ -0.37
SMPD4-205ENST00000431183 GOLGA8DPQ0D2H9 430 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms