RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 NSMFQ6X4W1 530 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 SH3RF1Q7Z6J0 888 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 RANBP17Q9H2T7 1088 aaKnown RBP11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 STARD7Q9NQZ5 370 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 SUPT16HQ9Y5B9 1047 aaKnown RBP11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 LAMA3Q16787 3333 aa11.95□□□□□ -0.5
HMGN1P38-201ENST00000431116 TRIM43BA6NCK2 446 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 SOWAHBA6NEL2 793 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 MOXD2PA6NHM9 499 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 ASB14A6NK59 587 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 ZNF213O14771 459 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 CLTBP09497 229 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 PDHBP11177 359 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 CST5P28325 142 aaPredicted RBP11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 GPR153Q6NV75 609 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 KLHDC9Q8NEP7 349 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 ESR2Q92731 530 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 BADQ92934 168 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 TRIM43Q96BQ3 446 aaPredicted RBP11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 ZKSCAN3Q9BRR0 538 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 TSEN34Q9BSV6 310 aaKnown RBP11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 KATNBL1Q9H079 304 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 SPC25Q9HBM1 224 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 CYP39A1Q9NYL5 469 aa11.94□□□□□ -0.5
HMGN1P38-201ENST00000431116 ASTN1O14525 1302 aa11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 KDM4AO75164 1064 aa11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 ZNF543Q08ER8 600 aa11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 KCNA10Q16322 511 aa11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 CCSAPQ6IQ19 270 aaPredicted RBP11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 NOL8Q76FK4 1167 aaKnown RBP11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 Q7L0L9 218 aa11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 FBXO16Q8IX29 292 aaPredicted RBP11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 DEFB123Q8N688 67 aa11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 PCSK9Q8NBP7 692 aaKnown RBP11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 NUP133Q8WUM0 1156 aa11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 GLT1D1Q96MS3 346 aa11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 TTC14Q96N46 770 aa11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 UPF3AQ9H1J1 476 aaKnown RBP11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 DDX49Q9Y6V7 483 aaKnown RBP11.93□□□□□ -0.5
HMGN1P38-201ENST00000431116 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 NFIBO00712 420 aa11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 ASGR1P07306 291 aa11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 GJA9P57773 515 aa11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 IRX6P78412 446 aaPredicted RBP11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 TNFAIP2Q03169 654 aa11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 GNASQ5JWF2 1037 aa11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 C9orf50Q5SZB4 431 aa11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 EEPD1Q7L9B9 569 aa11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 PURBQ96QR8 312 aaKnown RBP11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 DSCC1Q9BVC3 393 aa11.92□□□□□ -0.5
HMGN1P38-201ENST00000431116 ELP1O95163 1332 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 PTPDC1A2A3K4 754 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 DCDC2CA8MYV0 355 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 B4E1Z4 1266 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 KIAA0355O15063 1070 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 GOLGA8HP0CJ92 632 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 SNHG28P0DPA3 235 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 RAG1P15918 1043 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 ITGB8P26012 769 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 PDE4AP27815 886 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 NT5C2P49902 561 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 BEX3Q00994 111 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 SHHQ15465 462 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 IMMTQ16891 758 aaKnown RBP11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 TTC22Q5TAA0 569 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 SLC30A10Q6XR72 485 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 ANKRD33Q7Z3H0 272 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 TLK2Q86UE8 772 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 IQCA1Q86XH1 822 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 DGKHQ86XP1 1220 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 VTI1AQ96AJ9 217 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 TOX2Q96NM4 488 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 IL25Q9H293 177 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 TMEM39AQ9NV64 488 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 ADD3Q9UEY8 706 aaKnown RBP11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 PNMA2Q9UL42 364 aa11.91□□□□□ -0.5
HMGN1P38-201ENST00000431116 MROH7Q68CQ1 1323 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 WDR19Q8NEZ3 1342 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 A0A0U1RQG5 324 aaPredicted RBP11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 CTAGE5O15320 804 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 SMPD1P17405 629 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 PTGS1P23219 599 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 CALML3P27482 149 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 ALDH5A1P51649 535 aaPredicted RBP11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 FAAP100Q0VG06 881 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 BAATQ14032 418 aaPredicted RBP11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 CCDC178Q5BJE1 867 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 GPATCH4Q5T3I0 446 aaKnown RBP11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 RNF207Q6ZRF8 634 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 PNMA1Q8ND90 353 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 ZSCAN10Q96SZ4 725 aaPredicted RBP11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 KAT14Q9H8E8 782 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 VTA1Q9NP79 307 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 PDGFCQ9NRA1 345 aa11.9□□□□□ -0.5
HMGN1P38-201ENST00000431116 CTNNA3Q9UI47 895 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms