RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 ZNF512BQ96KM6 892 aaPredicted RBP9.45□□□□□ -0.9
ECHDC1-207ENST00000430841 TOX2Q96NM4 488 aa9.45□□□□□ -0.9
ECHDC1-207ENST00000430841 PPP1R12CQ9BZL4 782 aa9.45□□□□□ -0.9
ECHDC1-207ENST00000430841 ROBO3Q96MS0 1386 aa9.45□□□□□ -0.9
ECHDC1-207ENST00000430841 NCOR1O75376 2440 aa9.45□□□□□ -0.9
ECHDC1-207ENST00000430841 MYO5AQ9Y4I1 1855 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-207ENST00000430841 PNMA6EA0A0J9YXQ4 647 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 A0A0U1RQG5 324 aaPredicted RBP9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 ZBBXA8MT70 800 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 PGK2P07205 417 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 SHMT1P34896 483 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 AMHR2Q16671 573 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 PPP2R2DQ66LE6 453 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 ANKRD33Q7Z3H0 272 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 ERC1Q8IUD2 1116 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.44□□□□□ -0.97e-6■■■■□ 21.2
ECHDC1-207ENST00000430841 PBX4Q9BYU1 374 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 DIS3Q9Y2L1 958 aaKnown RBP9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 SYNRGQ9UMZ2 1314 aa9.44□□□□□ -0.9
ECHDC1-207ENST00000430841 MYO9BQ13459 2157 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 ELP1O95163 1332 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 GPR37O15354 613 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 S1PR4O95977 384 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 STAT3P40763 770 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 EPHB4P54760 987 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 FAAP100Q0VG06 881 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 KCNA10Q16322 511 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 RIOX2Q8IUF8 465 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 MSL3Q8N5Y2 521 aaKnown RBP9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 CCDC17Q96LX7 622 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 CCDC8Q9H0W5 538 aaPredicted RBP9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 VCPKMTQ9H867 229 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 PKD2L1Q9P0L9 805 aa9.43□□□□□ -0.9
ECHDC1-207ENST00000430841 SYNGAP1Q96PV0 1343 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 ZEB2O60315 1214 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 CSF2RAP15509 400 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 ITGB8P26012 769 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 PLCD1P51178 756 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 RARSP54136 660 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 TMEM132BQ14DG7 1078 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 SLC9C2Q5TAH2 1124 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 SNRNP48Q6IEG0 339 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 AACSQ86V21 672 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 LENG1Q96BZ8 264 aaPredicted RBP9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 DNAJC2Q99543 621 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 TEX13BQ9BXU2 312 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.42□□□□□ -0.95e-9■■■■■ 28.9
ECHDC1-207ENST00000430841 NKX2-4Q9H2Z4 354 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 RAPGEFL1Q9UHV5 662 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 TMX2Q9Y320 296 aa9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 SPTBN5Q9NRC6 3674 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 ZNFX1Q9P2E3 1918 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-207ENST00000430841 COL11A1P12107 1806 aaPredicted RBP9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 ZBED4O75132 1171 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 DUSP11O75319 330 aaKnown RBP9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 BCAR3O75815 825 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 FGBP02675 491 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 ACRP10323 421 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 HSP90AB4PQ58FF6 505 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 GNASQ5JWF2 1037 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 TMEM240Q5SV17 173 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 ZNF365Q70YC5 407 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 ITPRIPQ8IWB1 547 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 RPUSD2Q8IZ73 545 aaKnown RBP9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 ANKRD35Q8N283 1001 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 AP5M1Q9H0R1 490 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 HIPK3Q9H422 1215 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 KANSL2Q9H9L4 492 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 IL23AQ9NPF7 189 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 CXXC1Q9P0U4 656 aaPredicted RBP9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 FBXO40Q9UH90 709 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 TBX21Q9UL17 535 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 SLC4A7Q9Y6M7 1214 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 SMCHD1A6NHR9 2005 aa9.41□□□□□ -0.9
ECHDC1-207ENST00000430841 A0A1W2PRG0 241 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 GRXCR1A8MXD5 290 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 ARVCFO00192 962 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 VWA5AO00534 786 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 ADAMTS4O75173 837 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 WFS1O76024 890 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 ASGR1P07306 291 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 ACTN1P12814 892 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 TRIM27P14373 513 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 PDE6AP16499 860 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 TAL1P17542 331 aaPredicted RBP9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 IKQ13123 557 aaPredicted RBP9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 HIC1Q14526 733 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 ZNF792Q3KQV3 632 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 FAM83BQ5T0W9 1011 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 PADI6Q6TGC4 694 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 CLEC10AQ8IUN9 316 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 SDR42E1Q8WUS8 393 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 HERVK_113Q902F9 699 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 SLF1Q9BQI6 1058 aa9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 TLR7Q9NYK1 1049 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-207ENST00000430841 GMPR2Q9P2T1 348 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms