RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 HERC6Q8IVU3 1022 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 MSL3Q8N5Y2 521 aaKnown RBP12.06□□□□□ -0.48
ATG4B-212ENST00000430617 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 REPS2Q8NFH8 660 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 EAF2Q96CJ1 260 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-212ENST00000430617 FGD4Q96M96 766 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 SLC9A7Q96T83 725 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 SPC25Q9HBM1 224 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 GPR108Q9NPR9 543 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-212ENST00000430617 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-212ENST00000430617 ZNF214Q9UL59 606 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-212ENST00000430617 FPGT-TNNI3KV9GXZ4 949 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 ZNF536O15090 1300 aa12.06□□□□□ -0.48
ATG4B-212ENST00000430617 FAM186AA6NE01 2351 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 MICAL3Q7RTP6 2002 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-212ENST00000430617 RBAK-RBAKDNI3L0D1 243 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 GFRA3O60609 400 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 USP5P45974 858 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 PDE1AP54750 535 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 NKX3-2P78367 333 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 GABPAQ06546 454 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 TCF15Q12870 199 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 BMP2KLQ5H9B9 411 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 TMCO2Q7Z6W1 182 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-212ENST00000430617 CLASRPQ8N2M8 674 aaKnown RBP12.05□□□□□ -0.48
ATG4B-212ENST00000430617 MFSD14AQ96MC6 490 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 SUGCTQ9HAC7 445 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 PIH1D3Q9NQM4 214 aaKnown RBP12.05□□□□□ -0.48
ATG4B-212ENST00000430617 FAM86C1Q9NVL1 165 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
ATG4B-212ENST00000430617 LMCD1Q9NZU5 365 aa12.05□□□□□ -0.48
ATG4B-212ENST00000430617 RIF1Q5UIP0 2472 aaKnown RBP12.05□□□□□ -0.48
ATG4B-212ENST00000430617 GREB1LQ9C091 1923 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-212ENST00000430617 VWA5AO00534 786 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 PFKMP08237 780 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 CYP2C9P11712 490 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 ZP2Q05996 745 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 TTC6Q86TZ1 520 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 AACSQ86V21 672 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 PHOSPHO2Q8TCD6 241 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 PI4K2BQ8TCG2 481 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 DBNLQ9UJU6 430 aaKnown RBP12.04□□□□□ -0.48
ATG4B-212ENST00000430617 MTUS1Q9ULD2 1270 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 RIPK3Q9Y572 518 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 TTC41PQ6P2S7 1318 aa12.04□□□□□ -0.48
ATG4B-212ENST00000430617 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 H3BQ06 376 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-212ENST00000430617 CYP7A1P22680 504 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 C8orf34Q49A92 452 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 TSHZ3Q63HK5 1081 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 NEK9Q8TD19 979 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 VCPKMTQ9H867 229 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 ALG13Q9NP73 1137 aaKnown RBP12.03□□□□□ -0.48
ATG4B-212ENST00000430617 TRMT13Q9NUP7 481 aaKnown RBP12.03□□□□□ -0.48
ATG4B-212ENST00000430617 TMX2Q9Y320 296 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 DNAH14Q0VDD8 3507 aa12.03□□□□□ -0.48
ATG4B-212ENST00000430617 KMT2BQ9UMN6 2715 aaPredicted RBP12.02□□□□□ -0.48
ATG4B-212ENST00000430617 WDR87Q6ZQQ6 2873 aa12.02□□□□□ -0.48
ATG4B-212ENST00000430617 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.48
ATG4B-212ENST00000430617 WDR46O15213 610 aaKnown RBP12.02□□□□□ -0.49
ATG4B-212ENST00000430617 IRS1P35568 1242 aa12.02□□□□□ -0.49
ATG4B-212ENST00000430617 ZAP70P43403 619 aa12.02□□□□□ -0.49
ATG4B-212ENST00000430617 PTPN5P54829 565 aa12.02□□□□□ -0.49
ATG4B-212ENST00000430617 ARMCX2Q7L311 632 aa12.02□□□□□ -0.49
ATG4B-212ENST00000430617 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-212ENST00000430617 DDX11Q96FC9 970 aa12.02□□□□□ -0.49
ATG4B-212ENST00000430617 ALDH8A1Q9H2A2 487 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-212ENST00000430617 GNEQ9Y223 722 aaKnown RBP12.02□□□□□ -0.49
ATG4B-212ENST00000430617 DMXL1Q9Y485 3027 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 KIF28PB7ZC32 967 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 CABYRO75952 493 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
ATG4B-212ENST00000430617 ACTN1P12814 892 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 FSCN1Q16658 493 aaKnown RBP12.01□□□□□ -0.49
ATG4B-212ENST00000430617 TMEM63BQ5T3F8 832 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 TMEM179Q6ZVK1 233 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 CCDC144CPQ8IYA2 1237 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 DBNDD2Q9BQY9 259 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 CCDC8Q9H0W5 538 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-212ENST00000430617 ECHDC1Q9NTX5 307 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 MUTYHQ9UIF7 546 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
ATG4B-212ENST00000430617 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
ATG4B-212ENST00000430617 AKR1B1P15121 316 aa12□□□□□ -0.49
ATG4B-212ENST00000430617 TNFAIP2Q03169 654 aa12□□□□□ -0.49
ATG4B-212ENST00000430617 TTC39AQ5SRH9 613 aa12□□□□□ -0.49
ATG4B-212ENST00000430617 SNRNP48Q6IEG0 339 aaKnown RBP12□□□□□ -0.49
ATG4B-212ENST00000430617 TLK2Q86UE8 772 aa12□□□□□ -0.49
ATG4B-212ENST00000430617 PPP1R13LQ8WUF5 828 aa12□□□□□ -0.49
ATG4B-212ENST00000430617 BCL11AQ9H165 835 aa12□□□□□ -0.49
ATG4B-212ENST00000430617 ARHGEF10LQ9HCE6 1279 aa12□□□□□ -0.49
ATG4B-212ENST00000430617 DDX49Q9Y6V7 483 aaKnown RBP12□□□□□ -0.49
ATG4B-212ENST00000430617 MYH7P12883 1935 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms