RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 ERICH2A1L162 156 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 SOWAHBA6NEL2 793 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 OPLAHO14841 1288 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 DDAH1O94760 285 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 FARP2O94887 1054 aaPredicted RBP20.32■□□□□ 0.84
CTSD-203ENST00000429746 TFRCP02786 760 aaKnown RBP20.32■□□□□ 0.84
CTSD-203ENST00000429746 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 CNTN2Q02246 1040 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 SART3Q15020 963 aaKnown RBP20.32■□□□□ 0.84
CTSD-203ENST00000429746 QRICH1Q2TAL8 776 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 MAMDC4Q6UXC1 1216 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 ANKLE1Q8NAG6 615 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 DEFB118Q96PH6 123 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 CYP39A1Q9NYL5 469 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 BRPF3Q9ULD4 1205 aa20.32■□□□□ 0.84
CTSD-203ENST00000429746 SEC24BO95487 1268 aa20.31■□□□□ 0.84
CTSD-203ENST00000429746 KRT32Q14532 448 aa20.31■□□□□ 0.84
CTSD-203ENST00000429746 PURBQ96QR8 312 aaKnown RBP20.31■□□□□ 0.84
CTSD-203ENST00000429746 TINF2Q9BSI4 451 aa20.31■□□□□ 0.84
CTSD-203ENST00000429746 AGXT2Q9BYV1 514 aa20.31■□□□□ 0.84
CTSD-203ENST00000429746 KATNBL1Q9H079 304 aa20.31■□□□□ 0.84
CTSD-203ENST00000429746 CTDP1Q9Y5B0 961 aaPredicted RBP20.31■□□□□ 0.84
CTSD-203ENST00000429746 DNAH12Q6ZR08 3092 aa20.31■□□□□ 0.84
CTSD-203ENST00000429746 SNAI1O95863 264 aaPredicted RBP20.3■□□□□ 0.84
CTSD-203ENST00000429746 RXRAP19793 462 aa20.3■□□□□ 0.84
CTSD-203ENST00000429746 PRAMEF19Q5SWL8 479 aa20.3■□□□□ 0.84
CTSD-203ENST00000429746 ZNF467Q7Z7K2 595 aaPredicted RBP20.3■□□□□ 0.84
CTSD-203ENST00000429746 FBXL16Q8N461 479 aa20.3■□□□□ 0.84
CTSD-203ENST00000429746 DPF3Q92784 378 aa20.3■□□□□ 0.84
CTSD-203ENST00000429746 DDX49Q9Y6V7 483 aaKnown RBP20.3■□□□□ 0.84
CTSD-203ENST00000429746 ALPK3Q96L96 1907 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 PLEKHA8P1O95397 391 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 ZNF865P0CJ78 1059 aaPredicted RBP20.29■□□□□ 0.84
CTSD-203ENST00000429746 MFSD14CQ5VZR4 134 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 APOA5Q6Q788 366 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 SLC30A10Q6XR72 485 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 CATIPQ7Z7H3 387 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 RAB11FIP4Q86YS3 637 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 ANKRD35Q8N283 1001 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 IL17RAQ96F46 866 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 JAKMIP1Q96N16 626 aaKnown RBP20.29■□□□□ 0.84
CTSD-203ENST00000429746 OGDHLQ9ULD0 1010 aa20.29■□□□□ 0.84
CTSD-203ENST00000429746 C8orf34Q49A92 452 aa20.28■□□□□ 0.84
CTSD-203ENST00000429746 TMTC2Q8N394 836 aa20.28■□□□□ 0.84
CTSD-203ENST00000429746 TBC1D5Q92609 795 aa20.28■□□□□ 0.84
CTSD-203ENST00000429746 DDX11Q96FC9 970 aa20.28■□□□□ 0.84
CTSD-203ENST00000429746 PIGSQ96S52 555 aa20.28■□□□□ 0.84
CTSD-203ENST00000429746 VAT1LQ9HCJ6 419 aa20.28■□□□□ 0.84
CTSD-203ENST00000429746 FAM217BQ9NTX9 383 aaPredicted RBP20.28■□□□□ 0.84
CTSD-203ENST00000429746 SLC5A4Q9NY91 659 aa20.28■□□□□ 0.84
CTSD-203ENST00000429746 NR2E3Q9Y5X4 410 aa20.28■□□□□ 0.84
CTSD-203ENST00000429746 PFASO15067 1338 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 SYNGAP1Q96PV0 1343 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 ZBTB5O15062 677 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 RPS6KB1P23443 525 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 GHRHRQ02643 423 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 FUT2Q10981 343 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 USH1GQ495M9 461 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 SRBD1Q8N5C6 995 aaKnown RBP20.27■□□□□ 0.84
CTSD-203ENST00000429746 MSL3Q8N5Y2 521 aaKnown RBP20.27■□□□□ 0.84
CTSD-203ENST00000429746 MORC4Q8TE76 937 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 NUP133Q8WUM0 1156 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 SPZ1Q9BXG8 430 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 ZSWIM6Q9HCJ5 1215 aa20.27■□□□□ 0.84
CTSD-203ENST00000429746 NID2Q14112 1375 aa20.26■□□□□ 0.83
CTSD-203ENST00000429746 ADCY6O43306 1168 aa20.26■□□□□ 0.83
CTSD-203ENST00000429746 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
CTSD-203ENST00000429746 BAATQ14032 418 aaPredicted RBP20.26■□□□□ 0.83
CTSD-203ENST00000429746 HABP4Q5JVS0 413 aaKnown RBP20.26■□□□□ 0.83
CTSD-203ENST00000429746 NECAB2Q7Z6G3 386 aa20.26■□□□□ 0.83
CTSD-203ENST00000429746 RGS22Q8NE09 1264 aa20.26■□□□□ 0.83
CTSD-203ENST00000429746 COL20A1Q9P218 1284 aa20.26■□□□□ 0.83
CTSD-203ENST00000429746 TRIOBPQ9H2D6 2365 aa20.26■□□□□ 0.83
CTSD-203ENST00000429746 CCDC69A6NI79 296 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 H0YGN5 161 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 POTEB2H3BUK9 544 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 SMARCA1P28370 1054 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 RPS6P62753 249 aaKnown RBP20.25■□□□□ 0.83
CTSD-203ENST00000429746 NSMFQ6X4W1 530 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 TMTC3Q6ZXV5 915 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 FBXO11Q86XK2 927 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 CMTR1Q8N1G2 835 aaKnown RBP20.25■□□□□ 0.83
CTSD-203ENST00000429746 DIS3LQ8TF46 1054 aaKnown RBP20.25■□□□□ 0.83
CTSD-203ENST00000429746 TM6SF1Q9BZW5 370 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 DDX20Q9UHI6 824 aaKnown RBP20.25■□□□□ 0.83
CTSD-203ENST00000429746 NRBP1Q9UHY1 535 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 PNMA2Q9UL42 364 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 ABCB11O95342 1321 aa20.25■□□□□ 0.83
CTSD-203ENST00000429746 SEPT4O43236 478 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 CASTP20810 708 aaKnown RBP20.24■□□□□ 0.83
CTSD-203ENST00000429746 EVCP57679 992 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 TOB2Q14106 344 aaPredicted RBP20.24■□□□□ 0.83
CTSD-203ENST00000429746 BLOC1S2Q6QNY1 142 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 NFXL1Q6ZNB6 911 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 Q6ZUG5 572 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 ARMCX2Q7L311 632 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 MICU3Q86XE3 530 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 CCDC144CPQ8IYA2 1237 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 FANCBQ8NB91 859 aa20.24■□□□□ 0.83
CTSD-203ENST00000429746 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms