RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 SH2D3CQ8N5H7 860 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 COG1Q8WTW3 980 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 EPB41L5Q9HCM4 733 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 CEP104O60308 925 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 PRDX5P30044 214 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 NONOQ15233 471 aaKnown RBP eCLIP15.26■□□□□ 0.036e-7■■■□□ 17.6
SGMS1-203ENST00000429490 DCAF17Q5H9S7 520 aaPredicted RBP15.26■□□□□ 0.03
SGMS1-203ENST00000429490 TMC4Q7Z404 712 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 STAG2Q8N3U4 1231 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 SLC44A5Q8NCS7 719 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 NLRP3Q96P20 1036 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 PLEKP08567 350 aaPredicted RBP15.26■□□□□ 0.03
SGMS1-203ENST00000429490 EEF1GP26641 437 aaKnown RBP15.26■□□□□ 0.03
SGMS1-203ENST00000429490 CEP85LQ5SZL2 805 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 FBXL16Q8N461 479 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 GIMAP7Q8NHV1 300 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 MED15Q96RN5 788 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 KRT12Q99456 494 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 LRRC1Q9BTT6 524 aa15.26■□□□□ 0.03
SGMS1-203ENST00000429490 KLRF2D3W0D1 207 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 E7EVH7 732 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 BAG3O95817 575 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 ATP2C1P98194 919 aaPredicted RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 MUM1L1Q5H9M0 696 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 ADAT2Q7Z6V5 191 aaKnown RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 RRP36Q96EU6 259 aaKnown RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 RPGRIP1Q96KN7 1286 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 PHF20Q9BVI0 1012 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 HYOU1Q9Y4L1 999 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 MAGEA9P43362 315 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 POLR2FP61218 127 aaKnown RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 ZBED6P86452 979 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 EZH2Q15910 746 aaKnown RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 CFAP221Q4G0U5 840 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 CT47A1Q5JQC4 288 aaPredicted RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 MICALCLQ6ZW33 695 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 PACSIN2Q9UNF0 486 aaPredicted RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 ABCC12Q96J65 1359 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 SEMA3EO15041 775 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 LDHBP07195 334 aaKnown RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 GNA11P29992 359 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 KIF11P52732 1056 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 TRIM28Q13263 835 aaKnown RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 KCTD19Q17RG1 926 aaPredicted RBP15.25■□□□□ 0.03
SGMS1-203ENST00000429490 TICAM2Q86XR7 235 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 IFT20Q8IY31 132 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 CCDC114Q96M63 670 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 NFU1Q9UMS0 254 aa15.25■□□□□ 0.03
SGMS1-203ENST00000429490 HGSO14964 777 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-203ENST00000429490 SLC9C1Q4G0N8 1177 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 ZSCAN29Q8IWY8 852 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-203ENST00000429490 SCLT1Q96NL6 688 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 EHD4Q9H223 541 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 CCDC87Q9NVE4 849 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 LIMA1Q9UHB6 759 aaKnown RBP15.24■□□□□ 0.03
SGMS1-203ENST00000429490 HEXIM1O94992 359 aaKnown RBP15.24■□□□□ 0.03
SGMS1-203ENST00000429490 OR52Z1P0C646 297 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 PMS1P54277 932 aaKnown RBP15.24■□□□□ 0.03
SGMS1-203ENST00000429490 PROCA1Q8NCQ7 364 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-203ENST00000429490 TMEM60Q9H2L4 133 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 FRMPD2Q68DX3 1309 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-203ENST00000429490 KCNK3O14649 394 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 KIAA0753Q2KHM9 967 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 HERC4Q5GLZ8 1057 aaPredicted RBP15.24■□□□□ 0.03
SGMS1-203ENST00000429490 ZFYVE27Q5T4F4 411 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 NAA35Q5VZE5 725 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 LRRC31Q6UY01 552 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 ADGRA1Q86SQ6 560 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 MS4A14Q96JA4 679 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 PCDHA13Q9Y5I0 950 aa15.24■□□□□ 0.03
SGMS1-203ENST00000429490 DDAH1O94760 285 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 KLHL30Q0D2K2 578 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 DIXDC1Q155Q3 683 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 CDKAL1Q5VV42 579 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 USP17L2Q6R6M4 530 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 CARD10Q9BWT7 1032 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 FAM184BQ9ULE4 1060 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 PCDHA4Q9UN74 947 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 FAM169AQ9Y6X4 670 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 CCNE1P24864 410 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 STK4Q13043 487 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 TXNRD1Q16881 649 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 CCDC84Q86UT8 332 aaPredicted RBP15.23■□□□□ 0.03
SGMS1-203ENST00000429490 TCP1P17987 556 aaKnown RBP15.23■□□□□ 0.03
SGMS1-203ENST00000429490 GFPT1Q06210 699 aaPredicted RBP15.23■□□□□ 0.03
SGMS1-203ENST00000429490 CALCRLQ16602 461 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 ANKRD40Q6AI12 368 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 CPLX4Q7Z7G2 160 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 MSANTD4Q8NCY6 345 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 HNRNPLLQ8WVV9 542 aaKnown RBP15.23■□□□□ 0.03
SGMS1-203ENST00000429490 LSM14BQ9BX40 385 aaKnown RBP15.23■□□□□ 0.03
SGMS1-203ENST00000429490 HPCAL4Q9UM19 191 aa15.23■□□□□ 0.03
SGMS1-203ENST00000429490 MECOMQ03112 1051 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 EVX2Q03828 476 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 DYDC1Q8WWB3 177 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 DMGDHQ9UI17 866 aaKnown RBP15.22■□□□□ 0.03
SGMS1-203ENST00000429490 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.22■□□□□ 0.03
SGMS1-203ENST00000429490 MAP2K7O14733 419 aa15.22■□□□□ 0.03
SGMS1-203ENST00000429490 KRT14P02533 472 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms