RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 PDS5AQ29RF7 1337 aaKnown RBP9.89□□□□□ -0.83
CDH13-202ENST00000428848 KIAA1551Q9HCM1 1747 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 BRWD3Q6RI45 1802 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 A0A087WUV0 522 aaPredicted RBP9.88□□□□□ -0.83
CDH13-202ENST00000428848 M0R2N6 131 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 ZPR1O75312 459 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 PRPF6O94906 941 aaKnown RBP9.88□□□□□ -0.83
CDH13-202ENST00000428848 SYF2O95926 243 aaKnown RBP9.88□□□□□ -0.83
CDH13-202ENST00000428848 EEF1GP26641 437 aaKnown RBP9.88□□□□□ -0.83
CDH13-202ENST00000428848 PMS1P54277 932 aaKnown RBP9.88□□□□□ -0.83
CDH13-202ENST00000428848 DYNLL1P63167 89 aaKnown RBP9.88□□□□□ -0.83
CDH13-202ENST00000428848 SLC10A5Q5PT55 438 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 FAM182BQ5T319 152 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 TADA2BQ86TJ2 420 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 THAP9Q9H5L6 903 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 TAF1P21675 1872 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 TARSL2A2RTX5 802 aaKnown RBP9.88□□□□□ -0.83
CDH13-202ENST00000428848 TRIM49BA6NDI0 452 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 PPFIA4O75335 1185 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 MCM7P33993 719 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 NLRP5P59047 1200 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 CCDC148Q8NFR7 591 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 RPGRIP1Q96KN7 1286 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 NLRP3Q96P20 1036 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
CDH13-202ENST00000428848 ANKRD2Q9GZV1 360 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 ACBD3Q9H3P7 528 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 DISC1Q9NRI5 854 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 ABCF2Q9UG63 623 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 GUCA1BQ9UMX6 200 aa9.88□□□□□ -0.83
CDH13-202ENST00000428848 LUC7L2Q9Y383 392 aaKnown RBP9.88□□□□□ -0.83
CDH13-202ENST00000428848 RASSF10A6NK89 507 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 RPS6KA4O75676 772 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 RHOBTB3O94955 611 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 ATP1A1P05023 1023 aaKnown RBP9.87□□□□□ -0.83
CDH13-202ENST00000428848 MYL1P05976 194 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 SRGNP10124 158 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 TTI2Q6NXR4 508 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 TPTE2Q6XPS3 522 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 EGFL6Q8IUX8 553 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 CTCFLQ8NI51 663 aaPredicted RBP9.87□□□□□ -0.83
CDH13-202ENST00000428848 MMS19Q96T76 1030 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 CXorf56Q9H5V9 222 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 SH3GLB2Q9NR46 395 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 HDAC6Q9UBN7 1215 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 NARFQ9UHQ1 456 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 SAR1BQ9Y6B6 198 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 FAM205AQ6ZU69 1335 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 USP17L12C9JPN9 530 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 USP17L21D6R901 530 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 MCM3P25205 808 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 MYH10P35580 1976 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 USP8P40818 1118 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 GYG1P46976 350 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 NT5C2P49902 561 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 HSP90B2PQ58FF3 399 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 RCSD1Q6JBY9 416 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 LRRC31Q6UY01 552 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 GPATCH11Q8N954 259 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 GIMAP8Q8ND71 665 aaPredicted RBP9.87□□□□□ -0.83
CDH13-202ENST00000428848 TACO1Q9BSH4 297 aaKnown RBP9.87□□□□□ -0.83
CDH13-202ENST00000428848 CCSER1Q9C0I3 900 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 KBTBD4Q9NVX7 518 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 HPCAL4Q9UM19 191 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 MAPK8IP1Q9UQF2 711 aa9.87□□□□□ -0.83
CDH13-202ENST00000428848 ENC1O14682 589 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 NMT2O60551 498 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 CALML3P27482 149 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 STAT6P42226 847 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 DNM2P50570 870 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 KRT83P78385 493 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 CDK17Q00537 523 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 EVX2Q03828 476 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 SF3B2Q13435 895 aaKnown RBP9.86□□□□□ -0.83
CDH13-202ENST00000428848 DNAJC21Q5F1R6 531 aaKnown RBP9.86□□□□□ -0.83
CDH13-202ENST00000428848 BLIDQ8IZY5 108 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 RETREG2Q8NC44 543 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 LINC00116Q8NCU8 138 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 BANK1Q8NDB2 785 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 LRRC15Q8TF66 581 aa9.86□□□□□ -0.83
CDH13-202ENST00000428848 NOC3LQ8WTT2 800 aaKnown RBP9.86□□□□□ -0.83
CDH13-202ENST00000428848 DUSP9Q99956 384 aaKnown RBP9.86□□□□□ -0.83
CDH13-202ENST00000428848 RTCBQ9Y3I0 505 aaKnown RBP9.86□□□□□ -0.83
CDH13-202ENST00000428848 ANO9A1A5B4 782 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 RCCD1A6NED2 376 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 KCNQ2O43526 872 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 ERFEQ4G0M1 354 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 SBK1Q52WX2 424 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 CCDC122Q5T0U0 273 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 FOXR1Q6PIV2 292 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 NBPF5PQ86XG9 351 aaPredicted RBP9.85□□□□□ -0.83
CDH13-202ENST00000428848 CCDC170Q8IYT3 715 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 EHBP1Q8NDI1 1231 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 CCDC102AQ96A19 550 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 NSUN4Q96CB9 384 aaKnown RBP9.85□□□□□ -0.83
CDH13-202ENST00000428848 NUP58Q9BVL2 599 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 DCP1AQ9NPI6 582 aaPredicted RBP9.85□□□□□ -0.83
CDH13-202ENST00000428848 PCDHA4Q9UN74 947 aa9.85□□□□□ -0.83
CDH13-202ENST00000428848 TFR2Q9UP52 801 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms